Geobacter sp. SVR: GSVR_16610
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Entry
GSVR_16610 CDS
T10318
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
gev Geobacter sp. SVR
Brite
KEGG Orthology (KO) [BR:
gev00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gev03016
]
GSVR_16610
Enzymes [BR:
gev01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
GSVR_16610
Transfer RNA biogenesis [BR:
gev03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
GSVR_16610
Prokaryotic type
GSVR_16610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
PDEase_II
zf-C2H2_Z280C_D
Motif
Other DBs
NCBI-ProteinID:
BCS53353
LinkDB
All DBs
Position
complement(1791400..1792509)
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AA seq
369 aa
AA seq
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MKLRLPFRYLEPAFFAGLLDDPLLFVRIRPLRRALLFDCGQIAHLSKRVVKPIDTVFITH
AHMDHVMGIPTLVRHHHVSPRPLDIFGPPGIAERIDHQLRGYDWNLSEPGWVTIRVHEIR
PEHILHYSFSGPHGFACRFEREEPRTGREIWSCPYAVVEAELLDHRLPVLAFRLTEKEAF
AIDPDRLERLGLMPGEWIAELKKRVWKHRPQAEGSAPAGTMPASYEGGGNHTALYESIRK
KRPAASLGYLCDVGRTPDNVAKIEGLLRDVTLLCADCTFLAEDEDRARVSYHLCTGDLNH
LSGILRPCYLLPMHLSKSYLRRTEDIYRELAPPPDTTVLRLPAHIVPPPLTVEDVKGWLT
VDHQTADRP
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgaagctacgcctccccttccgctacctggagccggcctttttcgcgggcctgctggac
gaccctttgctctttgtccgtatccgcccgctccggcgggccttgctgttcgactgcgga
cagatcgcccatctgtccaaacgggtcgtcaagccaatcgacacggtgtttatcacccat
gcccatatggaccatgtcatgggcatccccaccctggtccgccatcaccatgtgtctccc
cgccccctggatatcttcggtccgcccggaatcgctgaacggatcgaccaccagttgcgg
ggatacgactggaacctgagcgaaccgggctgggtcactatccgcgtccacgagatccga
cccgagcacatcctgcactacagtttcagtggtccccacggttttgcctgtcgcttcgag
cgggaagaaccgcggacagggagagagatctggtcctgcccctatgccgtggtggaggcg
gaactgctcgatcaccggctgccggtgctggccttcaggctcacggaaaaagaggccttc
gccatagatccggaccggctggagcgtttggggctgatgccgggagagtggatcgcagag
ctgaagaaacgggtctggaaacatcgcccacaggcggagggcagtgcaccggccggcacc
atgccggcctcgtacgagggaggagggaaccacacagcactttacgagagcatccgcaaa
aaacgtcctgctgcgtcgctcggctatctgtgcgacgtgggccggacccccgataacgtc
gcaaagatcgaagggcttttgcgggacgtcaccctgctctgcgccgactgcacgtttctg
gcagaggacgaggaccgggcccgcgtttcctatcacctctgcaccggcgatctcaatcat
ttgagcgggatacttcgcccctgctacctgctgccgatgcacctctccaagagctacctg
cgccggactgaagacatctaccgcgaactggctccccctcccgacaccaccgtgctgcgg
ctgccggcgcacatagtcccgccccccctgacggtcgaggatgtgaagggctggctgacg
gtcgatcaccagacggctgacaggccatag
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