Geobacter sp. SVR: GSVR_17540
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Entry
GSVR_17540 CDS
T10318
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gev Geobacter sp. SVR
Brite
KEGG Orthology (KO) [BR:
gev00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gev03016
]
GSVR_17540 (truB)
Enzymes [BR:
gev01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GSVR_17540 (truB)
Transfer RNA biogenesis [BR:
gev03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GSVR_17540 (truB)
Prokaryotic type
GSVR_17540 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
BCS53446
LinkDB
All DBs
Position
1886019..1886933
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AA seq
304 aa
AA seq
DB search
MLDGFFVIDKPAGITSHDVVSRVRRILGTRKVGHTGTLDPFATGVLPVAVNDGTKAIPFL
DEGLKQYEAVMRLGVSTDTLDMTGRITAEADASGVARQQLDEVLARFTGSIDQVPPMYSA
IKRDGQPLYKLARQGVEVERQSRRVEIHRLELTALELPFVSLRVTCSRGTYVRSLADDIG
TALGCGAALETLRRTLSGPFALAAACSLDALEQAAASSSLDTLRMSPTAALCHLAEIPLS
EAGLTRVRHGRSPELQETQLEAWPACEEPVLVRLCRQGALVAVAQLEPFADRSPRIVLKR
VFAC
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
ttgctagacggttttttcgttattgacaaacctgccggcatcacctcccatgacgtggtc
agtcgcgtgcgccggattctcggcacccgcaaggtgggccataccggaactctcgatccc
tttgccaccggtgtcctgccggttgccgtcaacgacggcaccaaggcgatcccctttctc
gatgaaggtctcaagcagtacgaggcggtgatgcgactgggagtgtccaccgacaccctc
gatatgaccggccgaatcacggccgaggcggacgcttccggggtggcccggcagcagttg
gacgaggtgttggcccgtttcaccggttcgatcgaccaggtgccgcccatgtactcggcc
atcaagcgtgacgggcagccgctctacaaactagcccgccagggggtggaggtagaacgc
cagtcccgccgggtcgagattcaccgcctggagctgacggccctggaactccccttcgtt
tcgctgcgggttacctgttcgcgcggcacctacgtccgctcgttggcggacgacatcggc
accgccctcggctgcggcgccgcactggagaccctgcgccgcaccctcagcgggcctttt
gctctggctgccgcctgcagtctggatgcgttggaacaagccgcggcaagcagttcactg
gacacgttgcggatgtctccgacggcagcgctgtgtcatctggccgagattccgctttcc
gaggcggggctgaccagggtccggcacggccgttctccggaattgcaggagacccagctg
gaggcctggcctgcctgcgaagagcctgtgctggtgcgactctgccgtcagggggccctg
gtggcggtggcccagttggagcccttcgccgaccgcagcccgcgcatcgtgctgaagcgg
gtctttgcgtgctga
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