KEGG   Geobacter sp. SVR: GSVR_17750
Entry
GSVR_17750        CDS       T10318                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
gev  Geobacter sp. SVR
Pathway
gev02020  Two-component system
gev02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:gev00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    GSVR_17750 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    GSVR_17750 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gev03021]
    GSVR_17750 (rpoN)
Transcription machinery [BR:gev03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     GSVR_17750 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_3
Other DBs
NCBI-ProteinID: BCS53467
LinkDB
Position
1902366..1903805
AA seq 479 aa
MAMEMRQQLKMTQQLVMTPQLQQAIKLLQLTRLELQDVVRQELEENPLLEETLEAEEVRE
PEPLESAEKEVEPGNTVEEFREVETGDDTLRDWDSYLDGYNYSSGEQFGGEDDRPSFENL
LTRKGTLVDHLLWQLHMGHFSVEEVRIGEEIIGNIDEGGYLRSSLEEICQACSLDEESVL
PVLERIQEFDPTGVGARDLRECLLIQARFLGMQGSVVERILLHHLKDLETRKYKEIGRAL
GVDLNQVLVAAKIIGGLDPRPGRIYGSEDVHYISPDIFVSKLGDEYVVMLNEEGLPNLKV
SPFYAEARSNGSVDSRAEEYIGEKMRSAMWLIKSIQQRQRTIYRVAKSIIRFQREFLDRG
IDYLRPLVLRDVAEDIGMHESTISRVTTNKYMQTPQGLFELKYFFNSGLSTSGGDFVASE
SVKNRIKEIIEKEDCRKPLSDQKIAEMLSGETVNIARRTVTKYREVLKIGSSSERKRHF
NT seq 1440 nt   +upstreamnt  +downstreamnt
atggccatggagatgcgccaacaactgaagatgacccagcaactggtgatgaccccccag
ttgcagcaggccatcaaactgctccaactgacccgcctggagcttcaggatgtggtgcgg
caggaactggaagaaaacccgctgctggaagagacgctcgaggcggaagaggtccgcgag
cccgagcctttggagtcggccgaaaaagaggtcgaacccggcaacacggtggaagagttc
cgcgaagtggagaccggcgacgacaccctgcgcgattgggacagctacctggacgggtac
aattacagttccggcgaacagttcgggggggaggacgaccgcccttccttcgaaaacctg
ctgacccgcaaaggcaccctggtcgatcatctcttgtggcagcttcacatggggcacttc
agtgttgaagaagtgcgtatcggcgaggagatcatcggcaatatcgatgaggggggctac
ctgcggtcatccctggaggagatctgtcaggcatgctccctggatgaagagtcggtgctg
ccggtgctggagcgtattcaggaattcgatccgaccggtgtcggggcgcgcgatctgcgg
gaatgcctgctgattcaggcccgtttcctggggatgcaggggagcgtggtcgagcggatt
ctgctccatcacctgaaagacctggagacccgcaaatacaaggaaatcgggcgtgccctg
ggggtcgacctgaaccaggtgctggtggcggccaagatcatcggcgggctcgatccgcgg
ccgggcaggatctacggctccgaggacgtgcactatatctctccggatatcttcgtttcg
aagctgggcgatgagtacgtggtcatgctgaacgaagaagggttgcccaacctgaaggta
agcccgttttatgcggaagcgcgcagcaatggttcggtcgattcccgtgccgaggaatac
atcggcgaaaagatgcggtccgccatgtggctgatcaagagcatccagcagcggcaacgc
acgatctatcgagtcgccaagagcatcatccggtttcagcgcgagtttctcgaccgtggt
atcgattatctgcggccgctggtgctgcgcgatgtggccgaggacatcggcatgcacgaa
tcgaccatcagccgcgtaaccaccaacaaatacatgcagactccccaggggctgttcgaa
ctgaagtatttcttcaacagtgggctctccaccagcggtggggattttgtcgcctccgag
agcgtcaagaaccgcatcaaggagattattgaaaaggaagattgccggaaaccgctttca
gaccagaaaatcgccgagatgctgtcgggcgaaacggtcaacatcgcccggcgcacggtc
accaagtaccgcgaagtgttgaagatcggctcttcatcggagcgtaaacgacatttttga

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