Geobacter sp. SVR: GSVR_17750
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Entry
GSVR_17750 CDS
T10318
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
gev Geobacter sp. SVR
Pathway
gev02020
Two-component system
gev02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
gev00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GSVR_17750 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GSVR_17750 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gev03021
]
GSVR_17750 (rpoN)
Transcription machinery [BR:
gev03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GSVR_17750 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_3
Motif
Other DBs
NCBI-ProteinID:
BCS53467
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Position
1902366..1903805
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AA seq
479 aa
AA seq
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MAMEMRQQLKMTQQLVMTPQLQQAIKLLQLTRLELQDVVRQELEENPLLEETLEAEEVRE
PEPLESAEKEVEPGNTVEEFREVETGDDTLRDWDSYLDGYNYSSGEQFGGEDDRPSFENL
LTRKGTLVDHLLWQLHMGHFSVEEVRIGEEIIGNIDEGGYLRSSLEEICQACSLDEESVL
PVLERIQEFDPTGVGARDLRECLLIQARFLGMQGSVVERILLHHLKDLETRKYKEIGRAL
GVDLNQVLVAAKIIGGLDPRPGRIYGSEDVHYISPDIFVSKLGDEYVVMLNEEGLPNLKV
SPFYAEARSNGSVDSRAEEYIGEKMRSAMWLIKSIQQRQRTIYRVAKSIIRFQREFLDRG
IDYLRPLVLRDVAEDIGMHESTISRVTTNKYMQTPQGLFELKYFFNSGLSTSGGDFVASE
SVKNRIKEIIEKEDCRKPLSDQKIAEMLSGETVNIARRTVTKYREVLKIGSSSERKRHF
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggccatggagatgcgccaacaactgaagatgacccagcaactggtgatgaccccccag
ttgcagcaggccatcaaactgctccaactgacccgcctggagcttcaggatgtggtgcgg
caggaactggaagaaaacccgctgctggaagagacgctcgaggcggaagaggtccgcgag
cccgagcctttggagtcggccgaaaaagaggtcgaacccggcaacacggtggaagagttc
cgcgaagtggagaccggcgacgacaccctgcgcgattgggacagctacctggacgggtac
aattacagttccggcgaacagttcgggggggaggacgaccgcccttccttcgaaaacctg
ctgacccgcaaaggcaccctggtcgatcatctcttgtggcagcttcacatggggcacttc
agtgttgaagaagtgcgtatcggcgaggagatcatcggcaatatcgatgaggggggctac
ctgcggtcatccctggaggagatctgtcaggcatgctccctggatgaagagtcggtgctg
ccggtgctggagcgtattcaggaattcgatccgaccggtgtcggggcgcgcgatctgcgg
gaatgcctgctgattcaggcccgtttcctggggatgcaggggagcgtggtcgagcggatt
ctgctccatcacctgaaagacctggagacccgcaaatacaaggaaatcgggcgtgccctg
ggggtcgacctgaaccaggtgctggtggcggccaagatcatcggcgggctcgatccgcgg
ccgggcaggatctacggctccgaggacgtgcactatatctctccggatatcttcgtttcg
aagctgggcgatgagtacgtggtcatgctgaacgaagaagggttgcccaacctgaaggta
agcccgttttatgcggaagcgcgcagcaatggttcggtcgattcccgtgccgaggaatac
atcggcgaaaagatgcggtccgccatgtggctgatcaagagcatccagcagcggcaacgc
acgatctatcgagtcgccaagagcatcatccggtttcagcgcgagtttctcgaccgtggt
atcgattatctgcggccgctggtgctgcgcgatgtggccgaggacatcggcatgcacgaa
tcgaccatcagccgcgtaaccaccaacaaatacatgcagactccccaggggctgttcgaa
ctgaagtatttcttcaacagtgggctctccaccagcggtggggattttgtcgcctccgag
agcgtcaagaaccgcatcaaggagattattgaaaaggaagattgccggaaaccgctttca
gaccagaaaatcgccgagatgctgtcgggcgaaacggtcaacatcgcccggcgcacggtc
accaagtaccgcgaagtgttgaagatcggctcttcatcggagcgtaaacgacatttttga
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integrated database retrieval system