Geobacter sp. SVR: GSVR_18690
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Entry
GSVR_18690 CDS
T10318
Symbol
ku
Name
(GenBank) non-homologous end joining protein Ku
KO
K10979
DNA end-binding protein Ku
Organism
gev Geobacter sp. SVR
Pathway
gev03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
gev00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
GSVR_18690 (ku)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gev03400
]
GSVR_18690 (ku)
DNA repair and recombination proteins [BR:
gev03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
GSVR_18690 (ku)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
EFP
Glycos_transf_2
APC_rep
Motif
Other DBs
NCBI-ProteinID:
BCS53561
LinkDB
All DBs
Position
complement(2010755..2011531)
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AA seq
258 aa
AA seq
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MKAMWSGSISFGLVNIPVKLFSGSESNKLDLDMLRKNDLCAIKYLRVCKDDNKEVPYGEI
VKGYEYTDGEYVVLTDQDFESAQAEKSHLIEILNFIDENEIDSRYFEKPYYLEPDKSGSK
AYVLLREALKRSGKVGLANYVLRNRGNIGIVKPFDKILVLNAIRYQEEVRSFEELKVPGT
EKISDQEIDLALKLIDQLSVAFDPSRYRDTYTDALKHLIEEKTRGIAVQPAAPKPQPAKV
VDIMALLKQSLKEHRKAA
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcaatgtggtcaggttcgatcagcttcggtctcgtcaatatcccggtgaagctg
ttcagcggctcggaaagcaacaagctcgacctcgacatgctccgcaagaacgacctgtgc
gcgatcaaatatctcagggtgtgcaaggatgacaacaaggaggtgccctacggggagatc
gtcaaggggtacgagtataccgatggcgagtatgtggtgctgaccgatcaggacttcgaa
agtgcccaggccgagaaaagtcatctgatcgagatcctcaacttcatcgacgagaacgag
atcgactcccggtactttgaaaagccctattatctcgaaccggacaagtccggatcaaag
gcctatgtactgctgcgcgaggccttgaagcgatcgggcaaggtcggcctcgccaattac
gtgctcagaaaccggggcaacatcggcattgtcaaaccctttgacaagatcctggtcctg
aatgccatcaggtatcaggaggaggtgcggagcttcgaggagttgaaggtacccggcacc
gaaaaaatcagtgatcaggagatcgatctggccctcaagctgatcgaccagttgtcggtt
gcattcgacccttcccgataccgggacacctataccgatgcactcaagcacctgatcgag
gaaaagacccgcggcatcgctgtccagcccgcagcaccgaaaccgcagcccgccaaagta
gtggacatcatggccctgctcaagcagagcctgaaggagcatcgcaaggcggcctga
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