Geobacter sp. SVR: GSVR_19540
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Entry
GSVR_19540 CDS
T10318
Name
(GenBank) peptidase C39
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
gev Geobacter sp. SVR
Pathway
gev02010
ABC transporters
gev03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
gev00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GSVR_19540
03070 Bacterial secretion system
GSVR_19540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gev02000
]
GSVR_19540
02044 Secretion system [BR:
gev02044
]
GSVR_19540
Transporters [BR:
gev02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
GSVR_19540
Secretion system [BR:
gev02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
GSVR_19540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
ABC_ATPase
AAA_21
AAA_29
AAA_22
AAA_18
AAA_16
DUF87
MeaB
RsgA_GTPase
AAA_28
Motif
Other DBs
NCBI-ProteinID:
BCS53646
LinkDB
All DBs
Position
2092867..2095020
Genome browser
AA seq
717 aa
AA seq
DB search
MTPDGPTHAPSEDASAPPIDSALACFVMLARFHAVAVEPDQIRHQYGGSGHKLGTTEILL
AAKAHGLKARVVTTRFERLDRTPLPAIAETIDGEFVILARVDADQVLFQDPHAGRPLQCH
RDEWLARWNGRLILFASRASLTGDLARFDFSWFIPAIVKYRKLLGEVLLVSLFLQIIGLA
TPLFFQVVMDKVLVHHGLTTLDVIAVGLLVVSLFEVLMTGLRTYVFSHSCNRIDVELGAR
LFRHLLHLPLAYFQARRVGDSVARVRELENIRNFLTGQALTSVLDLFFSVVFIGVMLYYS
GWLTLIVVLSLPCYAIISVLITPLLRARLNEKFARGAENQSFLVEMVSGIETVKSMSVEP
QVTRRWGNQLAAYVAAGFKVTSLANIGSQCVSLVQKLVTVATMWLGARLVINGTLSVGQL
IAFNMLAGRVASPVMRLAQLWQDFQQVGISMLRLGDILNTRTEVVQSRAQLPAIQGRIEF
DHVYFRYRSDGPEILRDIDLSIAPGEVVGIIGRSGSGKSTLTKLLQRLHVPERGRVLIDG
VDIVLADPAWLRRQIGVVLQENLLFNRSIRDNIALADPGLPMEAVIRAAQQAGAHDFIVE
LPEGYDTMIGEHGVGLSGGQRQRLAIARALITNPRILIFDEATSALDYESERIIQNNMRF
ICRNRTVIIIAHRLSAVRSTDRILAMDRGMIVEEGPHLDLVSREGGYYAHLYSMQAG
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgacccctgacggcccgactcacgctccctccgaagacgcttccgctccccctatcgac
agcgccctggcctgcttcgtcatgttggcccgttttcatgctgttgcggtggagccggac
cagatcaggcaccagtacggcggcagcggccacaaacttggcactacggagatcctgctg
gctgccaaagctcatgggctcaaggctcgcgtcgtaaccacccgcttcgaacgcctcgac
cgcacccccttgccggccattgccgaaaccattgacggcgaattcgtcattcttgcccgc
gtggatgccgatcaagtgctctttcaggacccccatgccggccgccccctgcagtgccac
cgggacgaatggctggcccgatggaacggcaggctgatcctgtttgcttcgcgggccagc
cttaccggcgatctggcgcgcttcgacttcagctggttcatccccgccattgtcaaatac
cgcaaactgctgggcgaggtgctgctggtctccctgttcctccagatcatcggcctggcg
acaccgctcttctttcaggtggtgatggacaaggtcctggtccaccacggcctgacgacc
ctggacgttatcgccgtggggcttctggtggtttccctcttcgaggtcctgatgaccggg
ctgcgcacctatgtgttctcccatagctgcaaccgtatcgatgtggaactgggagcccgg
ctgttccgtcatctgcttcatctgcccctggcctatttccaggcacgcagagtaggggat
tcggttgcccgcgtgcgggaactggagaacatccgtaacttcctgaccggccaggccctg
acctcggtgctggacttgtttttctccgtggtcttcatcggcgtcatgctctactacagc
ggctggcttaccctgatcgtggtgctgtcgctgccctgctacgcaatcatctcggtcctg
atcacccctttgctgcgggcccggctcaatgaaaaattcgcccgcggagctgagaaccag
tcttttctggtggaaatggtcagcggcatcgaaaccgtcaagtccatgtcggtggagccg
caggtgacccgccgctggggcaaccagctggcagcctatgtggcggccggcttcaaggtc
accagcctcgccaatatcggtagccagtgcgtatcactggtccagaaactcgttaccgtg
gcaaccatgtggctgggggctcggctggtgatcaacgggaccctcagcgtggggcagttg
atcgctttcaacatgctggccggccgggtggctagcccggtcatgcggctggcgcagtta
tggcaggactttcagcaggtcgggatctccatgctgcggctgggcgacatcctcaatacc
cgcaccgaggtcgttcaaagcagggcgcagttgcctgccattcaagggcggatcgagttc
gaccacgtgtacttccgctaccgctcagacggtcctgagatcctccgcgacatcgatctc
tccatcgctcccggcgaggttgtcggcatcatcggccgttccgggtccggcaagagcacc
ctgaccaaactgctgcaacgcctgcatgtgcccgagcgcggacgggtgctgatcgatggc
gtggatatcgtgctggccgatcctgcctggctcaggcggcagatcggcgtggtgctgcag
gaaaacctgcttttcaaccgcagcatccgcgataacatcgccctggccgacccggggctg
cccatggaggcggtgatccgggccgcgcaacaggcaggtgcccacgacttcatcgtcgag
ctaccggaaggatatgacaccatgatcggcgagcacggcgtggggctgtccggcggacag
cgccagagacttgccattgccagggccctgatcaccaacccgcgcatcctgatttttgac
gaggcgaccagtgccctggattacgagtccgaacgcatcatccagaacaacatgcggttc
atctgtcgcaaccgcacggtcatcatcatagcccatcgcctttctgcggtgcggagcacg
gaccgcatactggccatggatcgcggcatgatcgtggaggaagggcctcacctggacctc
gtgtcacgggaagggggctactacgcgcatctgtactccatgcaggcggggtga
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