Geobacter sp. SVR: GSVR_20060
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Entry
GSVR_20060 CDS
T10318
Symbol
aspS
Name
(GenBank) aspartate--tRNA(Asp/Asn) ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
gev Geobacter sp. SVR
Pathway
gev00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gev00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
GSVR_20060 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gev01007
]
GSVR_20060 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gev03016
]
GSVR_20060 (aspS)
03029 Mitochondrial biogenesis [BR:
gev03029
]
GSVR_20060 (aspS)
Enzymes [BR:
gev01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
GSVR_20060 (aspS)
Amino acid related enzymes [BR:
gev01007
]
Aminoacyl-tRNA synthetase
Class II (A)
GSVR_20060 (aspS)
Transfer RNA biogenesis [BR:
gev03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
GSVR_20060 (aspS)
Prokaryotic type
Other AARSs
GSVR_20060 (aspS)
Mitochondrial biogenesis [BR:
gev03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
GSVR_20060 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
BCS53698
LinkDB
All DBs
Position
2152244..2154028
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AA seq
594 aa
AA seq
DB search
MDTLGSWKRTHYCGDLTAKDVGSEVILMGWSLRRRDHGGLIFIDLRDREGIAQVVFDPEL
SSQAHAVAESVRSEFVLAIKGKVIPRPEGTVNPNMKTGEVEIQVSECKLLNRSKPLPFML
DEYSDINENIRLKHRYLDLRRPQLQHNLILRSKVAQVTRSYLTENGFLELETPFLTKSTP
EGARDFLVPSRINQGCFYALPQSPQIFKQILMISGFDRYFQVVRCFRDEDLRADRQPEFT
QIDCEMSFIDREDIITVMEGLIARIFKEAKGVEVQLPVERITYAEAIRRFGVDNPDMRFG
MELCELTDLVKGSGFKVFADVAAKGGCIRGINAKGCARFSRKEIDDLTEFVKIYGAKGLA
YVKIENGEWHSPIAKFFTSDEIAAMNAAFGAEEGDLLFFVADKPKVVNDSLGKLRNHLAG
ILQLTSKDDYRFVWVTDFPLLEWDEEEKRWAAVHHPFTAPMDEDLPFVESDPGRCRAKAY
DLVLNGNEIGGGSIRIHQEQVQSLMFRLLGLSEESARSKFGFLLDALEFGTPPHGGIAFG
MDRLIMLLTGSDSIRDVIAFPKTQKGACLMSEAPSLVENKQLRELGIRLAEKQG
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggatacgctgggcagttggaaacggactcattactgtggcgatttgacggcaaaggat
gtcggcagtgaagtgatcctgatgggatggtcgctgcgccgccgcgatcatggtgggttg
atcttcatcgatctgcgcgatcgcgagggcatagcccaggttgtcttcgatccggagctg
agcagccaggcccacgcagtggccgagtcggtgcgcagcgagttcgtactggctatcaag
ggtaaggtcatcccgaggccggaggggacggtcaatccgaacatgaagaccggtgaagtg
gaaatccaggtcagcgagtgcaagctgctgaaccgctctaagccgcttcccttcatgctc
gacgaatacagcgacatcaacgagaacatccggctgaaacaccgctatctcgatctgcgc
cgtccgcagctccagcacaacctcatcctccgttcgaaggtagcccaggtaacgcgcagt
tacctgacggaaaacggcttccttgagctggaaacccctttcctgacgaaatccacgccg
gaaggtgcccgtgacttcctggtgccctcccgcatcaaccagggctgtttctacgctctg
ccccagtccccccagatattcaagcagatcctgatgatctctggatttgaccggtatttc
caggtggtgcgctgcttccgcgacgaggacctgcgggccgaccgccagccggagtttacc
cagatcgattgcgagatgtcgttcatcgaccgcgaagacatcattaccgtgatggagggc
ttgatcgcccgcatcttcaaggaggccaaaggggtcgaagtgcagttgccggtcgagcgg
atcacctatgccgaggccatcaggcgtttcggcgtcgataacccggacatgcgcttcggc
atggagctgtgcgaactgaccgatctggtcaaaggctcgggtttcaaggtgtttgccgat
gttgccgcaaaagggggatgcatccgggggatcaatgccaagggatgcgccaggttctcc
cgcaaggagatcgacgatctgacggaattcgtcaagatctacggcgccaagggactggcc
tacgtcaagatagaaaacggcgagtggcattcccccatagccaaatttttcacctccgac
gagattgcggccatgaacgcagcgttcggtgccgaggaaggcgacctgctgttcttcgtg
gccgacaagcccaaggtggtcaacgactcgctgggcaagctgcgcaatcaccttgccggc
atcctgcaactgaccagcaaggacgactaccgcttcgtgtgggttaccgattttccgctg
ctggagtgggacgaggaggaaaaacgctgggctgcggtgcatcatccctttaccgctccc
atggatgaggatctgccgtttgtggaatccgatcccggccgttgccgcgccaaggcctac
gacttggtgctcaatggcaacgaaatcggcggaggctccatcaggattcaccaggagcag
gtgcagtcgctgatgttcaggctgctcgggctctcggaagagtcggcccgcagcaagttc
ggcttcctgctggatgccctcgaattcggtactccccctcacggcggcatcgccttcgga
atggatcgcctgatcatgctgctgaccggcagcgactcgatccgcgacgtcatcgccttt
cccaagacccagaaaggcgcctgcctgatgtccgaggccccctcgctggtagagaacaag
caactgcgggagttgggaatccggctggctgaaaagcaggggtaa
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