Geobacter sp. SVR: GSVR_21150
Help
Entry
GSVR_21150 CDS
T10318
Symbol
mutM_1
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
gev Geobacter sp. SVR
Pathway
gev03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gev00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GSVR_21150 (mutM_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gev03400
]
GSVR_21150 (mutM_1)
Enzymes [BR:
gev01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
GSVR_21150 (mutM_1)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GSVR_21150 (mutM_1)
DNA repair and recombination proteins [BR:
gev03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GSVR_21150 (mutM_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Ribonuc_L-PSP
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
BCS53807
LinkDB
All DBs
Position
2269601..2270425
Genome browser
AA seq
274 aa
AA seq
DB search
MPELPEVESTAQALRESRPGLSDRRIEEVQVLWPGVLQDVSVHDFERRLLHARFTSVGRH
GKYLLLGLRSKEGNDSFLVVHLRMTGRLYLVAASEAIARHTRLAILLDQDMALRFDDPRK
FGRVWLVENASAVVSGLGPDALTVSFDDFAARMEACRRQIKPLLLDQSVLAGIGNIYADE
ILFRAGLHPLTNSGELTREQVRLLYEMIIAVLQEAVAAQGANIDGVFKAGQFVVNVYGRH
GSECRICGNRIVKLKVGQRGTHICTHCQGHGKPR
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaactgcccgaggtggagagtaccgcccaggctctgcgggagagccggcccggt
ctgtcggatcgccggatagaggaggtgcaggttctgtggcctggagtactgcaggatgtt
tctgttcacgatttcgagcggcgactgctgcatgcccggttcacctccgtcggccggcat
ggcaaatacctgctcctggggctgcggagcaaggagggaaacgactcctttctcgtcgtc
cacctgcgcatgaccggcaggctttacctggttgcggcttccgaggcgatcgcacgccat
acccgccttgccattctgctggatcaggatatggcattgcgtttcgacgatccgcgtaaa
tttggcagggtttggctggtggagaatgcctccgctgtggtgagcggactgggacccgac
gccctgacggtcagcttcgatgactttgccgccaggatggaggcctgccggcggcagatc
aagccgctgctgctggaccagtccgtcctggcaggcattggcaacatctatgccgatgag
atcctgtttcgtgccggcctgcacccgctcactaactccggagagcttacccgtgaacag
gtacggcttctgtacgagatgatcatcgcggtactgcaggaagcggtggcagcccagggg
gccaacatcgacggcgtattcaaggcgggacagttcgtggtgaacgtttacggccggcac
ggttcggagtgccggatctgcgggaacaggatcgtcaagctcaaggtagggcagcgcggg
acccatatctgcacccactgtcaggggcatggcaaaccacgttga
DBGET
integrated database retrieval system
