Geobacter sp. SVR: GSVR_22700
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Entry
GSVR_22700 CDS
T10318
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
gev Geobacter sp. SVR
Pathway
gev03018
RNA degradation
Brite
Enzymes [BR:
gev01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GSVR_22700 (rhlB)
Messenger RNA biogenesis [BR:
gev03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GSVR_22700 (rhlB)
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
BCS53962
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Position
2435216..2436601
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AA seq
461 aa
AA seq
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MKFDALMLPESLRRGIAEAGFIECTPIQQSTLPISLTGKDVAGQAQTGTGKTAAFLVTLF
SRLLSGTGNTGGHPRALILAPTRELVVQIEQDAQLLGKYCGLTIQAIYGGVDYMKQRDAL
REGADVVIGTPGRLIDYLKQKVYSLKQIEMLVIDEADRMFDMGFIADLRFILRRLPPFDK
RQNLMFSATLNQRVMELAYEFMNMPEKVSVTPEKMTAERIEQVIYHVSRKEKFPLLLGLL
RRDGMARTMIFINTKREGEYLHDRLNANGFPCRIISGDVEQKKRLRILEDFKEGKLPILI
ATDVASRGLHIDGVSHVINYDLPQDCEDYVHRIGRTARAGAEGKAISLADEDGAFYLEAI
EGYIRHKIPAEWAEDDLFVHDFIRVAKPERKKEFPRERAGEKRSGSRTRKKPSEKKAAAV
QPATPDQAAAPPVTGEPAKKKRRRRRKPAGAGTPPTENSAE
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgatgctcttatgctgcccgagtcgctccggagaggaatcgccgaagccggg
tttattgaatgtacaccgattcagcagagtaccctgccgatttcgctgacgggcaaagat
gtggccggccaagcccagaccggcaccggcaagacagccgccttcctggtgaccctgttt
tcccggttgctgtccggcaccggcaacaccggcggccatccccgtgccctgatcctggcc
cccacccgcgagctggtggtgcagatcgagcaggatgcccagctcctgggcaagtattgc
ggtctcaccatccaggccatctacggcggcgtggattacatgaagcagcgcgacgccctt
cgggagggagccgacgtggtgatcggcacgccggggcgattgatcgactatctcaagcag
aaagtctacagtctcaagcagatcgaaatgctggtgatcgacgaggccgatcgcatgttc
gatatgggattcattgcggatctgcgcttcattctgcgccgcctgcccccgttcgacaag
cgccagaacctgatgttttcggccacactcaatcagcgcgtcatggagttggcgtacgaa
ttcatgaacatgcccgaaaaggtgtcggtgacccctgaaaaaatgaccgccgaaagaatc
gagcaggtcatctaccacgtctcccgcaaggagaaattcccgctcctgctcggactgttg
cggcgcgacggcatggcgcgcaccatgatattcatcaataccaagcgcgagggggagtac
ctgcacgatcgcctgaacgccaacggctttccctgccgcattatttcgggcgatgtcgaa
cagaagaaacgcctgcgtatcctggaggatttcaaagagggcaagctgccgattctgatc
gccaccgatgtcgcttcacgcggcctgcacatcgacggcgtttcgcacgtcatcaattac
gatttaccccaggattgcgaggactacgtccatcggatcggccggaccgcgcgagccgga
gccgaaggcaaggcgatctccctggcggacgaggatggcgccttttacctggaagccatc
gaaggctacatccggcacaagatcccggccgaatgggccgaggacgacctgtttgtgcac
gacttcatccgggtggccaagccggaacgcaaaaaggaatttcccagggaacgcgccggc
gaaaaacgctccggcagcaggacccgcaaaaagccctctgaaaagaaagcggccgccgta
caacctgcaacacctgaccaggctgctgctccccctgtaacgggtgagcctgccaaaaag
aaacgcaggcgcagaagaaaacctgcaggcgcaggtactccccctacggaaaactcggcg
gaataa
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