Geobacter sp. SVR: GSVR_23130
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Entry
GSVR_23130 CDS
T10318
Name
(GenBank) putative RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
gev Geobacter sp. SVR
Brite
KEGG Orthology (KO) [BR:
gev00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gev03009
]
GSVR_23130
Enzymes [BR:
gev01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
GSVR_23130
Ribosome biogenesis [BR:
gev03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
GSVR_23130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
MTS
Cons_hypoth95
Methyltransf_4
Methyltransf_15
Methyltransf_23
Methyltransf_11
TRM5-TYW2_MTfase
Methyltr_RsmB-F
PCMT
Motif
Other DBs
NCBI-ProteinID:
BCS54005
LinkDB
All DBs
Position
complement(2479316..2480626)
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AA seq
436 aa
AA seq
DB search
MSEARVSIEKLAFGGSGVGRIDGKVCFVPYSCPGDELLVRITAEKRSYLNASIIDIIIPS
SRRVTPSCPLFGRCGGCDWQHVDYDCQLEAKRSILADALWRGARVPVELVRETIASPLRY
GYRSRVQFKLHGRSQRLQIGFFRQGSHFVEDAPAGCPIALPVINQALQRLREVLAEFPEP
DMIPQINIDCGDHGAVAIVNYIGRDADRTAAFFKKKFSSLSPLTGLYLQTGRKATLCRVC
GDDLLVYGLPDGHGGECSLGFRPGGFSQVNGLQNRAILALIRQFAAFGGHERILDLYCGN
GNFSLPLAGEVAHLTGIEEYPDSIAAAVDNARRNGIQNAEFLCSDATAGITRLAGEGRGV
FDTVILDPPRSGAADAVGALVRSGAEKIIYVSCDPSTLARDCGHLSGSGYQVLASVPVDM
FPQTYHLESVTLLQRV
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaggcccgtgtcagcatcgagaaactggctttcggaggcagcggtgtcggccgt
attgacggcaaggtctgctttgttccctacagctgccccggcgatgaacttctggtgcgc
atcaccgccgaaaaacgctcctatctgaacgcctccatcatcgatatcatcatcccctcc
agccggcgcgtcaccccttcctgccccctgttcggcaggtgcggcggttgcgactggcag
catgtggactatgactgccaactcgaagcaaagcgcagcatcctggccgatgcactctgg
cggggagccagggtgccggtcgaactggtgcgcgagacgatagcctctccgctccggtac
ggctatcgcagccgggtccagttcaagctgcacggacggtcgcagcgtctgcagatcggg
ttttttcggcaggggtcccatttcgtcgaagatgcgcccgcggggtgcccgatcgccctg
ccggtgatcaatcaggccttgcagcgcctgcgggaggtcctggcggagtttcccgaaccg
gacatgattccccagatcaatatcgactgcggcgaccacggggcggtggctatcgtcaat
tacatcggccgcgatgccgatcgtaccgccgcatttttcaaaaaaaaattcagcagcctg
tccccgctgaccggcctgtacctgcaaaccggccgcaaggccaccctgtgcagggtctgc
ggagatgatctgctggtctacggtctgccggacggtcatggtggtgagtgttctctcgga
ttcaggcccggcggtttttcccaggtcaacggcttgcagaaccgcgccatcctggctttg
atcagacaattcgcggcattcggcgggcacgagcgcattctggatctctactgcggcaac
ggcaatttttccctgcccttggcgggtgaggtagcccacctgaccggcatcgaagagtat
cccgattccattgccgctgctgttgacaatgcccgccgcaatgggatacagaatgcggaa
ttcctttgctccgacgccactgccggcatcacgcggctggccggggaggggcgcggcgtg
tttgatacggttatccttgatcccccccgcagcggagctgccgacgcggttggcgcactt
gtccggagcggggcggagaaaattatttatgtttcctgcgatcccagcacgctggcgcgg
gactgcggccatctgtcgggcagcgggtatcaggttctggcaagcgtgccggtcgacatg
ttcccgcagacctatcatctggaaagcgtaaccctgctgcagcgggtataa
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