Geobacter sp. SVR: GSVR_25460
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Entry
GSVR_25460 CDS
T10318
Name
(GenBank) putative RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
gev Geobacter sp. SVR
Brite
KEGG Orthology (KO) [BR:
gev00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gev03009
]
GSVR_25460
Enzymes [BR:
gev01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
GSVR_25460
Ribosome biogenesis [BR:
gev03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
GSVR_25460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
Methyltransf_15
MTS
Cons_hypoth95
PrmA
Methyltransf_4
Methyltransf_11
TRM5-TYW2_MTfase
TRAM
TRM
Ubie_methyltran
PCMT
Methyltrans_SAM
UPF0020
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
BCS54238
LinkDB
All DBs
Position
complement(2704937..2706424)
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AA seq
495 aa
AA seq
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MKRASKNVQNPKQNEVQRNRDTAGKGAGDTREAKLTRRSVLEVEISGLDDEGYGIASGGT
HSLRIAGALPGDSVRIGIDHVAQRIAFGHVKKILVPSPKRSKRPPCSQSAQCLGCPLVTM
KYRDQAEWKRQFILNQLRQYRSLGDVTVHPLLSPLRLIHYRTTVKLAIAGKHSEPCIGIF
RRSSHEVIDLNECPIHHPLVNRVIEVVRRGITKMKVPIYNPRSRMGVLRYLVVRISEAEQ
KAMVIFVTAERSYNEIHHLSKFVREQMPEVEVVAQNINTSEGNVILGSTDRFLTPKHHLT
ETIGDVTLMLSPRSFFQVNRDGACLIYDKVRQWAALTGRETVLDLYCGIGGIALSLATGA
RKVIGVEVVEPAVEDARKNARLNGVQNCTFEAGDAAELLEQFAEDNERVDLAVLNPPRKG
CDEQVLRRVAALAPAKLIYVSCSPNTLARDLNILNQLGYICREIQPVDMFPQTMHVENVA
LLEKMDKNLDNEDAC
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcgagcttcaaaaaacgtgcagaacccaaaacagaatgaagtgcagagaaacagg
gacaccgctggaaaaggtgccggtgacacgcgtgaggccaaactcacccgccgttccgtt
ctcgaggtggagatctcaggtctcgatgacgaaggctatggaattgcatccggcgggacg
cattccctgagaatcgccggcgccctgcccggtgattcggtcaggatcggcatagatcac
gtggcgcaacggatcgccttcgggcatgtcaagaagatcctggtgccatcccccaagagg
agcaaacgccccccctgcagccagagcgcccagtgtctcggctgcccgctggtgacgatg
aagtatcgcgatcaggccgaatggaagcggcaattcattctcaaccagcttcggcagtac
cgttccctgggggatgtcaccgtgcaccccctgctttccccgctgcgcctgatccactat
cgcaccaccgtcaagctggccattgcgggaaagcattccgaaccctgcatcgggatcttc
cgtcgctcctcccacgaggtgatcgacctgaatgaatgtccgatccaccaccctctcgta
aaccgggtgatcgaggtggtgaggcgcggcatcaccaagatgaaggtaccgatctataat
ccgcgcagcaggatgggagtgctgcggtacctggtggtgaggatctcggaagcggaacag
aaggcaatggtgatttttgtcaccgccgaacgctcctacaatgaaatacatcacttgtcg
aagttcgtgcgggaacagatgccggaggtggaggtggttgcccagaacatcaacacctcc
gaggggaatgtgatcctggggtccactgaccgtttcctcacgccgaagcatcatctgacc
gagaccattggcgacgtgaccctgatgctgtctccccggtcctttttccaggtgaaccgg
gacggtgcctgtctgatctatgacaaggtcaggcagtgggccgctctgaccgggcgcgag
accgtgctggatctctactgcggcatcggcgggatagcgttgtccctggctaccggcgcc
cgaaaggtgatcggcgtggaggtggtcgagcctgccgtggaggatgcccgtaagaatgcc
cgtctgaacggcgtgcaaaactgcactttcgaggcgggcgacgctgccgaattgctggaa
cagttcgccgaggacaatgagcgggtcgacctggcagtgctcaatccaccccgtaaagga
tgtgacgagcaggtgctgcggcgtgtggccgccttggctccggccaagctgatctatgtt
tcctgctctccaaacacccttgctcgtgacctcaacatactgaaccaattgggttatatc
tgtcgggagatccagccggtagacatgtttccccagacgatgcatgtggaaaatgtagcc
ttgttagaaaaaatggacaaaaaccttgacaacgaagatgcttgttga
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