Geobacter sp. SVR: GSVR_26430
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Entry
GSVR_26430 CDS
T10318
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
gev Geobacter sp. SVR
Pathway
gev03030
DNA replication
gev03430
Mismatch repair
gev03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gev00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GSVR_26430
03430 Mismatch repair
GSVR_26430
03440 Homologous recombination
GSVR_26430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gev03032
]
GSVR_26430
03400 DNA repair and recombination proteins [BR:
gev03400
]
GSVR_26430
Enzymes [BR:
gev01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GSVR_26430
DNA replication proteins [BR:
gev03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GSVR_26430
DNA repair and recombination proteins [BR:
gev03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GSVR_26430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
RNase_H_2
HUTI_composite_bact
Motif
Other DBs
NCBI-ProteinID:
BCS54335
LinkDB
All DBs
Position
2811481..2812113
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AA seq
210 aa
AA seq
DB search
MVGLVGNFTAVVIDFETTGLSPGYGDRTIEVGAVLVSGNRIVDRFQSLMNPGMRVSGFIE
EYTGITNTMLSTAPAIKEVMAQLKSFIGQHHLVAHNASFDSRFLDAEFKRIDHRRTNEFA
CSMLASRRLYPEAPNHRLETLVHYKKLKTDGVHHRALADAEMTAHLWLNMIADIKATYGV
RDVPFKLMQQVTKVPKKGLHDFLLKKATQY
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
ttggtagggcttgtgggaaattttactgccgtagtcattgactttgaaacaacaggactc
tctccgggatatggagacaggaccatcgaagtcggtgccgtcctggtttcgggcaaccgg
atcgtcgacaggtttcaaagtcttatgaatccgggaatgcgggtatccggtttcatcgaa
gaatacaccggtatcaccaacacgatgctctccacggcccctgccatcaaggaagtcatg
gctcagctcaaatcattcatcgggcaacaccacctggttgcccacaatgcatcctttgac
tcacgcttcctggatgcggagttcaagcgcatcgaccatcggagaaccaacgagtttgcc
tgctccatgctggcatcccggagattgtaccccgaagcccccaatcaccgacttgagacc
ctggttcactacaagaagctgaagactgatggcgttcatcatagagccttggcagatgcc
gaaatgaccgctcatctgtggctgaatatgatagcggatataaaagccacatatggggta
cgggatgtacccttcaagctgatgcagcaggtgacaaaggttcccaagaaaggactgcat
gattttctgttgaaaaaggccacccaatattag
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