Geobacter sp. SVR: GSVR_27900
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Entry
GSVR_27900 CDS
T10318
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
gev Geobacter sp. SVR
Pathway
gev00550
Peptidoglycan biosynthesis
gev01100
Metabolic pathways
gev01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
gev00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GSVR_27900 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GSVR_27900 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gev01011
]
GSVR_27900 (mrdA)
Enzymes [BR:
gev01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
GSVR_27900 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
gev01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
GSVR_27900 (mrdA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Tox-URI2
Motif
Other DBs
NCBI-ProteinID:
BCS54482
LinkDB
All DBs
Position
complement(2957037..2958938)
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AA seq
633 aa
AA seq
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MREKRFVREIMEMKHRTMVLSFVVGAIFFVLLLRLWHLQILSGEDYRSMSENNRLRFVPI
AASRGTILDRNGTVLVSNRPSFSLAVIPQEVKDKDDLLNKLAALLGLDRAEMADRWDKAK
GRAKYYPIVLASNISRDQVEIIEENKMRLPGVEIEMKPVRDYVNGNMGSHLLGYIGEVSE
DELNRPGFEEYNPGDYIGKNGIERNWEQELHGSDGGRQLEVDARGRVLRTVSESLPSVGN
SVVLTIDSAVQKSAERAFGDQAGAAVAMDVNTGEILAFVSNPGFDPSLFSGKLPADKWKE
YLEDKRHPLENKALTGQYPPGSTFKIISALAGLENGAINDSTSVNCTGSYKLGSSTFKCW
NKHGHGSTNLKKSLRESCDVYYYALGERLGVDLIAATAKKFLLGTPMGIGLTNEKGGMIP
STEWKLKRFGKRWFHGETLPVAIGQGYVLMTPIQLASMTATVANEGTIYRPHLVKRVVDG
DGKPLKEVKPEVIGTTGISADKFRLVKQGLFAVVNEPGGTGAAARLGDVTVAGKTGTSQV
VKLRDSKQGTPYQFRDHALFVAFAPYEKPEIAVAVVVEHGEHGASAAAPIAGRIMRAWFD
SKKPPKKAAPADSAQDDETDEETPPNGQEERRP
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgagagagaagcgcttcgttcgcgaaatcatggagatgaagcaccggaccatggtgctc
tcgttcgtggtcggcgcaatcttcttcgtgctcctgctgcgtctctggcatctccagata
ttgagcggcgaggattatcgcagcatgtcggagaacaaccgtctgcggttcgtgccgatc
gccgcttcgcgcggcaccattctggaccgcaacggcacggtgctggtcagcaatcgtcct
tcattcagtctggcggtcatcccccaggaggtcaaggacaaggacgacctgctgaacaag
ctggctgccctgcttggccttgacagggccgagatggccgatcgctgggacaaggccaag
ggaagggccaaatactatccgatcgtgctggcttccaacatcagccgtgaccaggtggag
atcatcgaggaaaacaagatgcggctgcccggggtcgaaatcgaaatgaagccggtgcgg
gactatgtcaacgggaacatggggtcccacctgctcggatacatcggtgaggtgtccgag
gatgaactcaaccgccccggtttcgaggagtacaatcccggcgactatatcggcaagaac
gggatcgaacgcaattgggagcaggaactgcacggcagcgacggaggccgccaactggag
gtggatgcccgtggccgggtattgaggaccgtctccgaatcccttccgtcggtcggcaac
agtgtggtgctgaccatcgactcggcggtacagaagagtgcggaacgggcattcggcgac
caggccggcgcggcggttgccatggacgtcaataccggtgaaattctggcttttgtcagc
aatcccggatttgatccctcgctgttcagcggcaagcttccggccgacaagtggaaggaa
tacctggaggacaagcgccacccgctggaaaacaaggccctgaccggccagtatccccca
ggctcaaccttcaagatcatcagtgccctggccgggctcgagaatggcgcgatcaacgac
tccacttcggtaaactgcaccggttcctacaagctcggatcctcgaccttcaagtgctgg
aacaagcatggtcacgggagcaccaacctgaaaaagtcgctgcgcgaatcgtgcgacgtc
tattactatgcactgggagagcgcctgggggtcgatctgatcgcggccactgccaagaaa
ttcctgctcggcacacccatgggcatcggcctgaccaacgaaaaggggggcatgatcccc
agcacagaatggaaactgaagcggttcggcaagcgctggttccatggcgaaacgttgccg
gtagccattggccagggctacgtgttgatgacccccatccaattggcctctatgactgcc
accgtggccaacgaaggaacgatatatcgcccccatctggtcaaacgcgtcgtggacggc
gacggaaagccgctgaaggaagtcaagcctgaagtaatcggcaccaccggcatatccgcc
gataagttccggctggtcaaacaggggctgttcgccgttgtgaacgaaccaggagggacc
ggtgctgcggcacggctcggcgatgtgaccgtggccggcaagaccggcacgtcccaggta
gtgaaactgcgcgacagcaaacagggcaccccataccagtttcgcgatcatgccctgttc
gtggcgttcgccccctatgaaaaaccggagatcgcggtggcggtggtggtcgagcatggc
gagcacggcgcttcagcggccgctccgattgccggtcgcatcatgagggcatggtttgac
tcgaaaaagccgcctaaaaaggccgcacctgctgacagcgcacaggatgacgaaacagat
gaagaaacgccgccgaatgggcaggaggaaaggcggccatga
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