Geobacter sp. SVR: GSVR_36110
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Entry
GSVR_36110 CDS
T10318
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
gev Geobacter sp. SVR
Pathway
gev03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gev00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GSVR_36110 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gev03019
]
GSVR_36110 (pcnB)
Enzymes [BR:
gev01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
GSVR_36110 (pcnB)
Messenger RNA biogenesis [BR:
gev03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
GSVR_36110 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
BCS55303
LinkDB
All DBs
Position
complement(3838432..3839820)
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AA seq
462 aa
AA seq
DB search
MKKSGSIRSKREEGSSVIIARQDHGISRKLMSPNALRVLYRLKDNGFVGYLVGGCVRDLL
LGREPKDFDVVTNATPGEIKRIFRNCRLIGRRFRLAHIHFLDEIIEVATFRSQASNEPEP
EPEEGNGTEQRQRHPRMLKDEEGMILRDNVYGTPEEDALRRDFTVNALSYNIADFSIIDY
VGGLADLNAGIIRIIGDPVVRFQEDPVRMLRAVRFAAQLGFTIEEGTLKALVAAADTIVR
AAPPRLYDEMLKLLLSGEGDKCYDLLRHTGLFAALFPHFSAWLDAESEGFPHTRFGEMLA
YVDSRIQQGDKISQPLLLALLFGEYLDEKAENFRRQGAPWQQSVYAALGEFMGEVCPIVL
ITNRVGFALRDIIAQQTRLKKVPGRRPEAFIARHDFNDIIAYCRITRGDQKEVARQLDWW
EARAQQQEPLPPPADSSEETEAPQRKRRRRRRRRPKADKKLG
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaagtggcagtatcaggtcgaaaagggaagagggcagttcagtaatcattgcc
cggcaggaccacggcatttcccgcaaactcatgagcccgaacgccctgcgggtcctctac
cgcttgaaggataacggctttgtcggctatctcgtgggcggctgcgtgcgcgacctgctg
ctcggccgggagccgaaggatttcgacgtggtaaccaacgccacccccggcgagataaag
cggatcttccgcaactgccgcctgatcgggcggcgcttccgtctggcgcacatccatttc
ctggacgagatcatcgaagtggcgaccttccgctcccaggcttccaacgagccggaaccc
gaaccggaggagggaaatgggacggaacagcggcagcggcacccgcgcatgctgaaggat
gaggagggcatgatcctgcgggacaacgtctacggcacacccgaagaggatgccctgcgc
cgggacttcaccgtcaatgcgctgtcctacaacatcgccgatttctcgatcatcgactac
gtcggcggcttggccgatctcaatgccggcatcatccgcatcatcggcgatccggttgtc
cgtttccaggaagacccggtgcggatgttgcgtgcggtgcggtttgccgcccagctcggc
tttaccatcgaggaggggaccctgaaggcgctggtggccgcggccgacaccatcgtcagg
gcggcaccaccgcgcctttacgacgagatgctcaagctcctgctctcgggggagggggac
aagtgctacgacctgctgcgccacaccgggctctttgcggcactcttcccccatttctcg
gcctggctcgatgccgagagcgagggcttcccccacacccggttcggcgaaatgctggcc
tacgtcgattcccgcatccagcagggggacaagatctcccaaccgttgctcctggcactg
ctgttcggcgagtacctggatgagaaggcggagaactttcgccgccaaggcgcgccctgg
cagcagagcgtgtatgccgctctcggagagttcatgggtgaagtgtgtcccattgtactg
atcacgaatcgtgtcgggtttgccctgcgcgacatcattgcccagcagacgcgcctgaaa
aaggtaccgggtcgccggccggaggcgttcatcgcccgccacgatttcaacgatatcatc
gcatactgccggatcacccgcggcgaccaaaaggaagttgccaggcagctcgactggtgg
gaagcccgtgcgcagcagcaggagccgctgccgccgccggccgactcctccgaggaaacc
gaggcgccacagcggaagagacggagacgccgccgacgaaggccgaaggcggataaaaag
ctcgggtaa
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