Geobacter sp. SVR: GSVR_37290
Help
Entry
GSVR_37290 CDS
T10318
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
gev Geobacter sp. SVR
Pathway
gev00300
Lysine biosynthesis
gev00470
D-Amino acid metabolism
gev01100
Metabolic pathways
gev01110
Biosynthesis of secondary metabolites
gev01120
Microbial metabolism in diverse environments
gev01230
Biosynthesis of amino acids
Module
gev_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
gev00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GSVR_37290 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GSVR_37290 (lysA)
Enzymes [BR:
gev01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
GSVR_37290 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ribosomal_L21e
Motif
Other DBs
NCBI-ProteinID:
BCS55421
LinkDB
All DBs
Position
3941952..3943265
Genome browser
AA seq
437 aa
AA seq
DB search
MKHFGPTKLEATLIPQIARQWGTPVYLHDQEYIENSCEQLLGMPNAYGLHVRYAMKANSD
RTVLRVVTNKGLDLDCSSMDEAARAHAAGVPYSRMMLTTQEVPSGEERAELEEMIRAGLK
YNVCSMTQFQLIADFATSNKIDLSIRVHPGAAGGGESTTRDTGSEYSCFGVHLNDVPTVK
ARADELGLRFTQVHVHIGSGGDPEKWRENIDRELGFVRDYFPDATTVSFGGGLKVARMPG
EKQADIASLGAYAMQRIQEFKAATGRELQMEIEPGTFVVANSGHIVTRIIDKKLTNEMNF
LIVDGGMELLTRPLLYGSEHPIAIVRQDGTLLSSEYDQTPAEGLKPFGIVGRCCESGDSV
RLDKEGNIVPLLIAEPEIGDYVVIGGTGAYSESMSPENYNSHRKPGAVMKTRSGELVQIR
KKQVREQLTQNELDVKL
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgaaacactttggtccgaccaaactggaggcaacgctcatcccgcagatagcgcggcag
tggggaacaccggtctatctgcatgatcaggaatacatcgaaaacagctgtgagcagctg
ctgggcatgccgaatgcgtacggtctgcatgtgcgctacgccatgaaggcaaactcggac
cgcaccgtgctgcgtgtcgttaccaacaaggggctggacctggattgctcctccatggat
gaagcggcccgtgcccatgcggccggggttccctacagccggatgatgctgaccacccag
gaggtgccttccggtgaggagcgcgcagagctggaagagatgatccgggccgggctgaag
tataatgtctgctccatgacgcagtttcagctgatcgccgacttcgccacaagcaacaag
atcgacctgtccatcagggtccatccgggagcagccggcggcggcgaaagcaccacccgc
gataccggcagcgaatattcctgcttcggcgtgcacctgaacgatgtccccacggtgaag
gcccgggctgacgaactggggctacgctttacccaggtacatgtccatatcggttccgga
ggggacccggaaaaatggcgcgagaacatcgaccgcgaactgggctttgtgcgcgactat
ttcccggatgccactaccgtgagcttcggcggcggtctcaaggtagcaaggatgccgggc
gagaaacaggccgacatcgcgtcgctgggcgcctatgccatgcagcgcatccaggaattc
aaggcggccaccggacgcgaactgcagatggagatcgagccgggcacctttgtggtggcc
aactcgggccatattgtcaccaggatcatcgacaagaaactgaccaacgagatgaacttc
ctgatcgtcgatggcggcatggagctcttgacccgcccgctgctgtacggttccgagcat
cccatcgccatcgtacgccaggacggcacgctgctctccagcgagtatgaccagacgccg
gctgaaggactgaagccgttcgggatcgtggggcgctgctgcgaaagcggcgactcggtg
cgtctcgacaaagagggcaacatcgtgccgctgctgatcgccgagccggaaatcggcgac
tatgtcgtcatcggcggcacaggtgcctattccgagagcatgtcgccggaaaactacaac
tcgcaccgcaagccgggagcggtcatgaagacccgcagtggcgagctggtgcagatcagg
aagaagcaggtgcgcgagcagctgacacagaacgagctggatgtgaaactgtaa
DBGET
integrated database retrieval system