Geobacter sp. SVR: GSVR_37380
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Entry
GSVR_37380 CDS
T10318
Symbol
rhlE1
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
gev Geobacter sp. SVR
Pathway
gev03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gev00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GSVR_37380 (rhlE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gev03019
]
GSVR_37380 (rhlE1)
Enzymes [BR:
gev01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GSVR_37380 (rhlE1)
Messenger RNA biogenesis [BR:
gev03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GSVR_37380 (rhlE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
BCS55430
LinkDB
All DBs
Position
complement(3951758..3953077)
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AA seq
439 aa
AA seq
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MLFDSLGLNSELLSAVASRGYTEPTPIQASAIPAILEGADILGGAQTGTGKTAAFALPIV
QMLGEQEITRKRRIPRALVLVPTRELAAQVSNEMNAYARRLSLRSTMIYGGVTIQAQIER
LHRGVDIVVATPGRLLDHAERGTVNLSTVQFLVLDEADRMLDLGFIDDIMRVSEYLPKKR
QTLLFSATYSASIKRLADDLLDRPRRIEVERKNIAADPVTQAAYMVEKSRKREMISFLIR
QGGWNRVLVFVRTRYGADKLTEELLYDGIKTAAIHSNKSQSIRNRTLSQFREGELRVLVA
TDVAARGLDIERLPHVVNYDLPQVPEDYVHRIGRTGRAGESGEAISLVAPEEKVLLAAIE
KLLTYPIPRRTLAEFPEVAPRRSLKIREQKAAAAPGKKKTKGKQPKQAGQPPAGRPRGGK
RRPRGAHRQRPAAGAAGRR
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgcttttcgattccctcggcctaaactccgagcttctcagcgccgtagcctcccggggc
tataccgagccgactccgatccaggcgtcagccatccccgccatcctggagggcgccgac
attctcggcggcgcccagaccggtaccggcaagaccgctgccttcgcgctccccatcgtc
cagatgctgggcgaacaggagatcacccggaagcgccgcattccccgggcgctggtgctg
gtcccgacccgggagttggccgcacaggtgagcaacgagatgaatgcctatgcccggcgc
ctgtcgctgcgctccaccatgatctacggcggcgtcaccatccaggcccagatcgagcgg
ctacaccggggtgtcgacatcgtggtggcgacgccgggtcggctcctggaccacgctgaa
aggggcactgtcaacctctccaccgtccagttcctcgtcctcgacgaggctgaccggatg
ctggacctggggttcatcgacgacatcatgcgggtttcggaatacctcccgaaaaagcgg
cagacgctcctcttttcggccacctattccgccagcatcaagcggctggccgacgacctg
ctcgaccggccccggcggatagaggtagagcgcaaaaacatcgccgccgatccggtaacg
caggcagcgtacatggtggaaaagagccgcaaacgggaaatgatctccttcctgatccgc
caagggggctggaaccgcgtgctggtctttgtccggacccgttacggcgccgacaagctg
accgaggagctcctctacgacgggatcaagaccgctgccatccacagcaataagagccag
tcgatccggaaccgtaccctgtcccagttcagggagggtgagctgcgggtgctggtggca
actgatgtggcagcccggggtttggacatcgagcggctcccccacgtggtgaactacgat
ctgccccaggtcccggaggattacgtgcaccggatcggccgcaccggccgcgccggggaa
agcggcgaggccatttccctggtggcgcccgaggaaaaggttctgctggccgctattgaa
aagctcctcacctatcccatcccccggcggaccctggcggaattccccgaggtggcgccg
cgacggagcctgaaaatccgggagcagaaggcggccgccgccccggggaagaagaaaacc
aaggggaagcagcccaagcaggccgggcagccaccggccggtagaccgcgcggcgggaaa
agacggccacggggcgcccaccggcaaagaccggcggccggggccgcaggtcgtaggtag
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