Geobacter sp. SVR: GSVR_38000
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Entry
GSVR_38000 CDS
T10318
Symbol
hdrA
Name
(GenBank) disulfide reductase
KO
K03388
heterodisulfide reductase subunit A2 [EC:
1.8.7.3
1.8.98.4
1.8.98.5
1.8.98.6
]
Organism
gev Geobacter sp. SVR
Pathway
gev00680
Methane metabolism
gev01100
Metabolic pathways
gev01120
Microbial metabolism in diverse environments
gev01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
gev00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
GSVR_38000 (hdrA)
Enzymes [BR:
gev01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.7 With an iron-sulfur protein as acceptor
1.8.7.3 ferredoxin:CoB-CoM heterodisulfide reductase
GSVR_38000 (hdrA)
1.8.98 With other, known, physiological acceptors
1.8.98.4 coenzyme F420:CoB-CoM heterodisulfide,ferredoxin reductase
GSVR_38000 (hdrA)
1.8.98.5 H2:CoB-CoM heterodisulfide,ferredoxin reductase
GSVR_38000 (hdrA)
1.8.98.6 formate:CoB-CoM heterodisulfide,ferredoxin reductase
GSVR_38000 (hdrA)
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Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Fer4_7
Fer4
Fer4_16
Fer4_2
Fer4_21
FAD_oxidored
Fer4_6
Fer4_10
FAD_binding_2
NAD_binding_8
GIDA
Fer4_9
DAO
Fer4_8
Pyr_redox_3
Fer4_3
Pyr_redox
Fer4_22
Amino_oxidase
HI0933_like
AlaDh_PNT_C
Thi4
Fer4_15
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
BCS55492
LinkDB
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Position
complement(4019194..4021191)
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AA seq
665 aa
AA seq
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MSRIGVFVCHCGENISRTVDVERVAAQVGMLPGVAFSTDYKYMCSDPGQTLLKRAIQEQR
LSHVVVAACSPRMHEKTFRKAVEAAGLNPFLCEMANIREHCSWVHEDKQEATEKAIEIVG
MMVERVKKNRVLPTITVPVTKRSLVIGGGIAGIQAALDIADAGHEVVLVEREPSIGGHMA
QLSETFPTLDCSQCIMTPKMVDVANHPKIKLYTYAEIEHVEGYIGNFQVTVRKKARSVDE
DRCTGCGVCMEKCPIKKIPNKFDCNRGMRPAIYVPFPQAVPNTPVIDREHCTKFRTGKCG
LCQKVCGPGAVDYEQEDQLIVEPVGAIVVATGFDLYSIAEKPKGSPIKGYGEFGHGKLPD
VIDGMTFERLASASGPTGGKILRPSDGKEPKQIVFIQCVGSRAREKGISYCSKICCMYTA
KHTMLYHHKVHDGQAYVFFMDARTPGKNYDEFWRRSIEEEEAVYIRGMVSRLYQKDDKIV
VMGSDISVGVQVEIEADMVVLATAVQPQAGAELLAQKLGISYDKYNFYSEAHAKLRPVEC
ATAGIYLAGACQGPKDIPDTVSQASAAAAKVMTLFAKDKLEREPVVAKVKDAGCVGCFYC
KKVCPYGAVEEKEMRDRQGNLVKVVAYVNPGVCGGCGTCQATCPSKSVELDGYTDEQIVA
MIEAL
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagaatcggcgtatttgtctgtcactgcggcgaaaacatatcgaggacggtggat
gtggagcgggtggctgcccaggtcggaatgcttccgggggtggccttttcgacggactac
aagtacatgtgctccgatcccggccagaccctgctgaagcgggccatccaggagcagcgg
ctttcccacgtggtggtggcggcctgctctccccgaatgcacgagaaaaccttccgcaag
gcagtggaggcggccggcctgaacccctttctgtgcgaaatggcaaatatccgcgaacac
tgctcctgggtccacgaagacaagcaggaggccacggaaaaggctatcgagattgtcggc
atgatggtggagcgggtcaagaagaaccgcgtgctgcccaccatcaccgtaccggtcacc
aagcgctcgctggtcatcggcggcggcatcgccggtattcaggccgccctggacattgcc
gatgcgggccacgaggtcgtgctggtggagcgggaaccctccatcggcggccacatggcc
caactttccgaaacgtttcccaccctcgactgctcccaatgcatcatgacccccaaaatg
gtcgatgtcgccaaccaccccaagatcaagctctacacctacgccgaaatagaacatgtc
gaggggtatatcggtaactttcaggtcacggtccgcaagaaggcccgttcggtggatgag
gacaggtgcaccggctgcggcgtctgcatggaaaagtgtcccatcaaaaagatccccaac
aaattcgattgcaatcgggggatgcgcccggccatctacgtcccctttccccaggcggta
cccaataccccggtcatcgaccgggaacactgcaccaaattcaggaccggtaaatgcggc
ctgtgccagaaggtgtgcggccccggcgccgttgactacgagcaggaagaccagctgatc
gtggaaccggtcggcgccattgtggttgccaccggctttgacctctactccatcgccgag
aaacccaagggctcccccatcaagggctacggcgaattcggccacggcaagctgccggat
gtcatcgacggtatgaccttcgagcgcctggcatcggcttccggccccactggtggcaag
atcctgcgcccttcggacggcaaggaaccgaaacaaatcgtcttcatccagtgcgtcggc
agcagggccagggaaaaagggatttcctactgttccaagatctgctgcatgtacactgcc
aagcataccatgctctaccaccacaaggtccacgatggccaggcctatgtcttcttcatg
gatgcccgtacgccgggcaagaactacgacgaattctggcgccgctccatcgaggaagag
gaggcggtctacatccgcggcatggtctcgcgcctctatcagaaagatgacaagatcgtg
gtcatgggtagcgacatttcggtcggtgtccaagtggagatcgaggccgacatggttgtg
ctggccacggctgtccagccccaggccggcgcggagttgctggcccagaaactgggcatc
tcctacgacaaatacaacttctactccgaagcccacgccaagctgaggccggttgaatgc
gccacggccggcatctacctggccggcgcctgccaggggcccaaggacatccccgacacc
gtcagccaggccagtgccgccgccgccaaggtgatgaccctgtttgccaaggacaagctg
gagcgggaaccggtggttgcaaaggtgaaggatgccggctgcgtgggctgcttttactgc
aaaaaggtttgcccttacggcgcggtggaggagaaggagatgcgcgaccgccagggcaac
ctggtcaaggtggtggcctacgtcaaccccggagtctgcggcggctgcggtacctgccag
gccacctgcccgtccaagtcggtggagcttgatgggtacaccgatgaacagatcgtggca
atgatagaggcgttataa
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