Geobacter sp. SVR: GSVR_38070
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Entry
GSVR_38070 CDS
T10318
Name
(GenBank) hypothetical protein
KO
K16291
L,D-transpeptidase ErfK/SrfK
Organism
gev Geobacter sp. SVR
Brite
KEGG Orthology (KO) [BR:
gev00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gev01002
]
GSVR_38070
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gev01011
]
GSVR_38070
Peptidases and inhibitors [BR:
gev01002
]
Cysteine peptidases
Family C82
GSVR_38070
Peptidoglycan biosynthesis and degradation proteins [BR:
gev01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
GSVR_38070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
LysM
Ldt_C
LysM3_LYK4_5
Motif
Other DBs
NCBI-ProteinID:
BCS55499
LinkDB
All DBs
Position
4027991..4028938
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AA seq
315 aa
AA seq
DB search
MRFGHHEADTVASLWCCRNYGWLSSVCRLLLIICCGGCLSGHCPAPAGAAQYSYATGFSG
KIRDYTIQMGESLFEIARRFDLGINSIHRANPGADLFIPAAGTRIILPTAWILPDVPEYE
GIVINLPELRLYLFSRDDYRSFATFPLGVGDLGYNTPVGAFTIIEKITAPAWYVPASIRR
EDPSLPAVVPPGPDNPLGSHALRLSLPSVLIHGTNSPWGIGMRSSHGCLRLYPEDILQLY
RLVRPGTRVTIVQQAVKASMRGGRVFIQVHQYDGVDYLREARRVLTGRDLFWRVDSSKLK
LALQERSGLPVDITR
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtttcggacatcacgaggctgacaccgtggcatccctgtggtgctgccgaaattac
ggttggctcagcagcgtatgcagactcctgctaatcatatgctgcggcggctgcctgtcg
ggacattgccctgcccctgccggtgcggcacagtacagctatgcgaccggcttcagcggt
aagatccgggactacacgattcagatgggggaatcgctgttcgaaatcgcccggcgtttc
gatctcggtatcaattcgattcatcgcgccaatccgggcgccgatctattcatccccgca
gcaggcacccggatcatactgcccaccgcctggatcctgcccgatgtgccggaatacgaa
ggaatcgtcatcaatctcccggaactgcgactgtaccttttttcccgtgacgactacagg
agctttgcgacctttcccctcggtgtcggcgacctgggatacaacactcccgtcggagct
ttcaccataatcgaaaaaataaccgcccctgcctggtacgtaccggcttcgatccgccgg
gaagatccgtcattgcccgccgtggtcccccctggaccggacaatcccctaggcagtcac
gccctgcgactttcgctgccttcagtcctgatccacggcacgaacagtccctggggtatc
ggcatgcggtcgagccatggctgcctgcgtctgtatccggaggatattcttcagctctac
cgtctcgtgcgtcccggaacccgcgtcaccatcgtgcagcaggcggtcaaagcctcgatg
cgggggggcagggtattcattcaggtacaccagtatgacggagtcgattacctgcgggag
gcgcgccgcgtactcaccggcagagacctgttttggcgtgtcgactcgtccaagctgaag
ctggccctgcaggaaaggagcgggctcccggtcgacattaccaggtaa
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