Geobacter sp. SVR: GSVR_40080
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Entry
GSVR_40080 CDS
T10318
Name
(GenBank) endonuclease III
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
gev Geobacter sp. SVR
Pathway
gev03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gev00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GSVR_40080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gev03400
]
GSVR_40080
Enzymes [BR:
gev01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
GSVR_40080
DNA repair and recombination proteins [BR:
gev03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GSVR_40080
Prokaryotic type
GSVR_40080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HTH_20
Motif
Other DBs
NCBI-ProteinID:
BCS55700
LinkDB
All DBs
Position
complement(4258032..4258907)
Genome browser
AA seq
291 aa
AA seq
DB search
MSFQSVPANPDQRNVLTAEEIGSFRELIYGHHRSHPRPMPWRETDDPYAILVSEIMLQQT
QVERVRKKYVEFLDAFPTPAALAAASLAEVLRVWQGLGYNRRAIALQRCCTAIMTRFNGK
VPGEIETLETLPGIGFYTARAVAAFAFCIAAPLIETNIRTVFLHLFFAGREQVADRDIMP
LVSATLDRSNPREWYYALMDYGVMLKQAHPNPGRRSAHHIRQSPFKGSNRELRSRILGAV
LAESGLSASQLKSCLEVEAELLEKNLCDLQREGFLIRVGSTLMVAGQSSSP
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgagttttcaaagcgttccggcgaacccggatcagaggaacgtgctgaccgcggaggag
atcggctcgttccgtgagctgatctacgggcatcaccgttcccatccccgtccgatgccg
tggcgtgaaacagacgatccctatgcgattctggtatcggagatcatgctgcagcagacc
caggtggaacgggtcaggaaaaaatacgtcgagtttctggatgccttccccacccctgct
gcattggccgcggcatcattggccgaggtgttgcgggtctggcaggggctgggttacaac
cgccgcgccattgccttgcagcgctgctgtacggccatcatgacccgctttaacggcaag
gtgcccggagagatcgaaacgctggaaacgctgcccggcatcggcttctataccgcccgc
gccgtggctgcctttgccttttgcattgccgcccccttgatcgaaaccaacatccggacg
gtctttctgcatctcttctttgcaggccgggagcaggttgccgaccgtgacatcatgccg
ctggtatcggccacattggaccgcagcaatccccgggaatggtactatgccctgatggat
tacggtgtgatgctgaagcaggcacatcccaatcccggccgtcggagtgcccatcatatc
cgtcagtcccccttcaaaggctccaaccgcgagttgcgcagcaggattctcggagcggtt
ctggcggaatcgggcctgtcggcgtcccagctgaaaagttgtcttgaggttgaagctgag
ctgctggagaaaaacctgtgcgacctgcaacgcgagggttttcttattcgggtcggttcc
accttgatggtggccgggcagtcgtcgtcgccatga
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