Geobacter sp. SVR: GSVR_41010
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Entry
GSVR_41010 CDS
T10318
Symbol
pcrA
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gev Geobacter sp. SVR
Pathway
gev03420
Nucleotide excision repair
gev03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gev00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GSVR_41010 (pcrA)
03430 Mismatch repair
GSVR_41010 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gev03400
]
GSVR_41010 (pcrA)
Enzymes [BR:
gev01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GSVR_41010 (pcrA)
DNA repair and recombination proteins [BR:
gev03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GSVR_41010 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
GSVR_41010 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
AAA_12
Terminase_6N
AAA_11
ResIII
Anticodon_2
CC4_CEP85
NCOA6_TRADD-N
Motif
Other DBs
NCBI-ProteinID:
BCS55793
LinkDB
All DBs
Position
4363018..4365345
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AA seq
775 aa
AA seq
DB search
MPQEENGEPFPLDGRVSTGYNNPMDLLKHLNPPQKEAVLYGEGPLLILAGAGSGKTRVIT
NRIAHLILERGVRPWNILAVTFTNKAAKEMAERVRKLSSHGDLPLIATFHSACGRILRRE
IHHLGFDSSFAIYDDRDSERLLKDILRELDLDEKRFSPTAVGARIDDYKNRGLFPEEIDP
VAAGDIYNAKIIQIYAAYQERLRKCNALDFGDLLIQTVRLLSEFPEVRRYYQERFQWILV
DEYQDTNPVQYHLIRLLAGERRNLCVVGDDDQSIYSWRGADIRNILEFEKDFPGVKIVRL
EQNYRSTATILKAAGEVVKQNYGRKGKTLWTDNPQGDPVCYRRVESDREEARFVCREIDR
LRSRGIPLEEMAVFYRTNAQSRQIEEALVSEALPYHIVGGVRFYARMEIKDILAYLRVLN
NPADEVSLKRIINVPARGIGATTIDRIAYQAAANGKSFYQALHDEDLVGLLGSVPRNKVT
TFADMIERFRAMLDTHSLPELAQTVMAESGYLARLKESRDEESAERLENLEQLLTAMEEF
SEKNPEGGLSEFLEQVALVSDLEQGEQGKPSVTLMTLHAAKGLEFKAVFMIGMEERLFPH
VRTLDDLDGMEEERRLCYVGMTRARERLYLLNARRRYLFGQEQSNPPSRFLRDIPAELLD
EEDSGLRTYSAATRVPGGRLQTASAGQRNENRQNDGMHNLAAAAAFSGSREIEVVPEPPE
EQGGVYIGMRVRHGKFGLGTVRKIEGSGDAQKVIVWFNSAGPKKLMLRFAGLERA
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaggaagaaaacggagagccgtttccgcttgacggtcgcgtttctacgggctac
aacaacccaatggacctgctaaaacacttgaacccgccccagaaagaggcggtactgtac
ggcgaagggccgctgttgatcctggccggcgccggctccggcaagacgcgcgtcatcacc
aaccgtatcgcccacctgatcctcgagcgcggggtacgcccctggaatatcctggctgtt
acctttaccaacaaggctgccaaagagatggccgaacgcgtcaggaaactgtccagccat
ggcgacctgccgctgatagccaccttccactccgcctgcggccgcatcctgcgcagggaa
atccatcacctgggctttgattcatcctttgccatttacgacgaccgcgactcggaacgc
ctgctcaaggatatcctcagggaactggacctggacgagaagcgcttctctcccactgcc
gtcggcgcgcgcatcgacgactacaagaatcgcggcctgttccccgaagagatcgatccg
gtggcggccggcgacatttacaatgcaaagatcatccagatctatgctgcctaccaggag
cgcctgagaaagtgcaatgcactggatttcggggacctcctgatccagacagtacggctg
ctgtcggaattcccggaggtgcgccggtactatcaggaacgcttccaatggatcctggtg
gatgagtatcaggataccaacccggtgcagtaccacctgatccgcctgctggcaggggaa
cgccggaacctgtgcgtggtaggtgacgacgatcagtcgatctattcctggcgaggggcc
gatattcgcaatatcctggaattcgaaaaagactttcccggggtgaagatcgtacggctc
gaacagaactaccgttccaccgccacaattctcaaggccgccggcgaggtggtcaaacag
aactatggccgcaaaggcaaaaccctctggaccgacaatccgcagggagatccggtctgc
tatcggcgggtcgaatcggaccgggaggaggcccgcttcgtctgccgtgagatcgaccga
ctgagatcccgcggcattccgttggaggagatggcggtcttctaccgcaccaacgcccaa
tcccgccagatcgaggaagccctggtttcggaggcgttgccctaccacatcgtcggcggt
gtccgcttctatgccaggatggagatcaaggatatcctggcctatctgcgtgttctgaac
aatccggcggacgaggtgtcgctgaagcggatcatcaatgtaccggcccgcggcataggc
gccacaacgatcgatcggatcgcctaccaggccgccgccaatgggaagagcttctatcag
gccctgcacgacgaggacctggtcggcctgctgggatctgtcccgcgaaacaaggtgact
acctttgcggatatgatcgaacgctttcgcgccatgcttgacacgcacagcctgccggaa
ctggcccagacggtgatggcggagagcggctatctggcccggctgaaagagagtcgtgac
gaggagagcgccgagcggctggaaaacctggagcagttgctgaccgccatggaggaattc
agcgagaagaaccccgagggggggctgtcggaatttctcgagcaggtagcgctggtgtcg
gacctggaacagggggaacagggcaagccgtcggtgacgttgatgaccctgcatgctgcc
aaagggctggaattcaaggcggtgttcatgatcggaatggaagagcggctctttccccat
gtccggacgctggatgatctggacggcatggaagaggagcgccgcctctgttacgttgga
atgacccgtgccagggagcgcctttatctcttgaacgcccgccggcgctacctgttcggc
caggagcagtccaacccgccgtcgcgttttctgagggatatcccggccgaattactggat
gaggaggacagcgggcttcgaacctactccgctgccactcgcgtgcccggcggccgcctg
cagaccgcatccgcagggcagcgcaacgaaaaccgtcagaatgacgggatgcataatctg
gcggcggcagccgccttctccggctcacgcgagatagaggtggtgcccgagccccccgag
gaacaggggggagtctacatcggcatgcgggtacgtcacggcaaattcggactcggtacg
gtccgcaagatcgaggggagcggcgacgctcaaaaggtcatcgtgtggttcaattcggcc
gggccgaaaaagctcatgctgcgctttgccggactggagcgggcataa
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