Geobacter sp. SVR: GSVR_43610
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Entry
GSVR_43610 CDS
T10318
Symbol
mutM_2
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
gev Geobacter sp. SVR
Pathway
gev03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gev00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GSVR_43610 (mutM_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gev03400
]
GSVR_43610 (mutM_2)
Enzymes [BR:
gev01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
GSVR_43610 (mutM_2)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GSVR_43610 (mutM_2)
DNA repair and recombination proteins [BR:
gev03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GSVR_43610 (mutM_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
Ribosomal_S13
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
BCS56053
LinkDB
All DBs
Position
complement(4659608..4660396)
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AA seq
262 aa
AA seq
DB search
MPELPDLTVFAENLHRRLAGGRITAVHRHGSGGRLNVSPAELSRALSGATIERVERAGKE
LCFRIGNGRLLYIHLMLNGGFRLAAQPLQRSAGDAIISIDFEQGVCLSLHDPKGLATVSL
DPPRDQGVPDALDVDAGLLKRLIAGKPRTLIKALLIDQKIIRGIGNAYADEILWQARISP
RSSAGKLPDEAVEALAAAISSVLLDAAQQLRKRHPDMIAGEFREFLAVHNPDRRESPGGR
SIRVETVSSKKTYFTDEQVLYS
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactgcccgacctgacggtattcgctgaaaatctccaccgccgcctggccggc
ggccgcattaccgcagtgcataggcacggcagcggcggacggctgaacgtgtcccccgca
gagctgtcccgcgccctgagcggcgccaccatcgagcgggtcgagcgggccggcaaggag
ctttgtttccggatcggcaacggccggctgctgtacatccacctgatgctgaatggcggc
ttccgtcttgcagcccagccgctccagcgctctgccggggatgccatcatcagcatcgac
ttcgagcaaggggtctgcctgagtctgcacgatcccaaagggctggcaacggtatcgttg
gatcccccacgggaccagggagtgccggacgccctggatgtggatgccggactgctgaag
cggctgatcgccggcaagccgcggacactgatcaaagcgctgctgatcgaccagaagatc
atccggggtatcggcaacgcctatgccgacgagatcctgtggcaagcccgcatctcaccc
cgctcgtcagcgggcaagctgccggatgaggcggtggaggcgctggcagccgcgatcagc
tcggtgctgctggatgccgcgcagcagctgcggaaacggcatcccgatatgatcgccggc
gagttccgggaattcctggccgtgcacaatcccgaccgcagggaatctcccggaggacgg
tcgatccgggtggagacggtttcgtcgaagaagacctacttcaccgatgagcaggtgctt
tactcgtaa
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integrated database retrieval system
