Georgenia sp. TF02-10: MF406_01985
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Entry
MF406_01985 CDS
T10482
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
gew Georgenia sp. TF02-10
Pathway
gew03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MF406_01985 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gew03400
]
MF406_01985 (recD)
Enzymes [BR:
gew01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MF406_01985 (recD)
DNA repair and recombination proteins [BR:
gew03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MF406_01985 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
RecD_N
AAA_11
Viral_helicase1
Helicase_RecD
UvrD-helicase
AAA_22
SH3_13
AAA_16
NTPase_1
AAA_28
TraI_hel_assoc_N
AAA
AAA_5
Flavi_DEAD
SRP54
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
UNX55080
LinkDB
All DBs
Position
433605..435764
Genome browser
AA seq
719 aa
AA seq
DB search
MSARPTGAGGVRAADGSPAAAPAGTTVGDVRLALHAPPLLTPFNAAGVLTAADVHVAARL
GRLAGETDQRVLLAVALAVRAVRAGSVCVRLDDLGAFAIPETEDTPAPASAAGPDPVGDT
AATATATATASPTAAAAAGVLPWPEPGGWAAAVAASPLVAAGVDGPVDRPVRWVGERLYL
DRYWRDELLVRRAVDGRLAGSVPGTPPGTPSGTAPRTPSQASPFASASTAPATPPGAPSP
IPPGAVAADRLSAVVHRLFPAAGDDRQRLAAATAVLSRLTVLTGGPGTGKTTTVARVLAV
LQEVAGPGLRIALAAPTGKAAARLQEAVRDAVASFADADRERVGAPEATTVHRLLGWQPG
TSTRFRHGAHHHLPHDVVVVDETSMVSLPLMARLLEALRPEARLVLVGDPDQLASVEAGA
VLGDLVGRPPVAAAVPSVEPFVPGDLTGQEREQLRNGVVRLTIVHRQDHGSAILPLAAAV
RAGDADRALAVLRAGDPSVTFTAVGERLTEEEVAPVRADAEAAGAALVAAARAGDAAGAL
EALSAHRLMLAHRRGPAGVARWAALVEEWVSAAAGPDPRPASAPQAGTPWYPGRPLLVTA
NDRETGLYNGDTGVLVADGDGGVVAVFGDPADPLRVRPHRLPPVETVHAMTVHRGQGSQF
RKVSIILPPATSPLLTRELLYTAVTRAREAVHVVGTAEAVRVAVGRPVRRASGLREPLT
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgccaggccgaccggggcgggcggtgtgcgggccgcggacgggtcgccggccgcg
gcaccggccgggactaccgtcggtgacgtccggctcgccctgcacgccccgccgctgctc
accccgttcaacgccgccggggtcctcaccgccgccgacgtgcatgtcgccgcgcggctg
ggccggctggccggggagaccgaccagcgggtcctcctcgccgtcgccctggcggtgcgg
gcggtgcgcgccgggtcggtatgcgtccggctggacgacctcggcgcgttcgcgatcccc
gagaccgaggacacccccgcacccgcgtcggcggccggccccgatccggtcggggacact
gccgcgacggcgacggcgacggcgacggcgagtccgacggcggccgcggcggccggggtg
ctgccgtggcccgagccgggcggctgggcggcggcggtggcggccagcccgctggtcgcc
gccggcgtggacgggcccgtggaccggccggtgcggtgggtgggcgagcgcctctacctc
gaccggtactggcgcgacgagctcctcgtgcgccgcgcggtcgacggccgcctcgccggc
tccgtgccgggcaccccaccggggacgccgtcgggcaccgcgccgcgaaccccgtcgcag
gcgtcaccgttcgcctcggcgtccaccgcgccggccaccccgccgggcgccccctcgccc
atcccgccgggcgccgtcgccgcggaccggctcagcgccgtcgtgcaccggctcttcccc
gccgcgggggacgaccggcagcggctggcggcggccacggcggtgctgagccggctcacc
gtgctcaccggcgggcccgggaccggcaagacgacgacggtcgcccgggtgctcgccgtc
ctgcaggaggtggccggccccgggctgcggatcgcgctggccgccccgaccggcaaggcc
gcggctcggctgcaggaggcggtgcgcgacgcggtcgcgagcttcgccgacgccgaccgg
gagcgggtgggcgcgcccgaggcgaccaccgtgcaccgcctgctcggttggcagccgggc
acctcgacccggttccggcacggcgcgcaccaccacctgccgcacgacgtcgtggtggtg
gacgagacgtcgatggtgtcgctgccgctcatggcccggctgctcgaggcgctgcgcccg
gaggcccgcctggtgctcgtcggcgaccccgaccagctcgcctcggtggaggccggcgcg
gtgctcggtgacctcgtcgggcgcccgccggtggccgcggcggtccccagtgtggagccg
ttcgtcccgggcgacctgaccggccaggagcgcgagcagctccgcaacggcgtcgtccgg
ctcaccatcgtccaccggcaggaccacggcagcgcgatcctgccgctcgccgccgcggtc
cgggccggcgacgccgaccgggcgctcgccgtcctgcgcgccggcgacccctcggtcacc
ttcaccgccgtgggggagcggctcaccgaggaggaggtcgcgccggtgcgggccgacgcc
gaggcggccggcgcggccctggtcgccgccgcccgggccggggacgcagccggggcgctg
gaggccctgtccgcgcaccggctcatgctcgcccaccggcgcggcccggccggggtcgcc
cgctgggccgccctggtggaggagtgggtcagtgcggcggccggcccggacccccgaccg
gcctcggcgccccaggccgggacgccgtggtacccgggccggccgctgctggtcaccgcc
aacgaccgcgagacgggcctgtacaacggggacaccggcgtcctggtcgccgacggcgac
ggcggcgtcgtcgccgtgttcggcgacccggccgacccgctccgggtgcggccgcaccgc
ctgccgccggtggagacggtgcacgccatgaccgtccaccgcgggcagggcagccagttc
cggaaggtctcgatcatcctgccgccggccacctccccgctgctcacccgcgagctgctc
tacaccgccgtcacccgcgcccgggaggcggtgcacgtcgtcgggaccgcggaggcggtc
cgggtggcggtcgggcgaccggtccgccgggctagcgggctgcgggagccgctgacctga
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