Georgenia sp. TF02-10: MF406_07150
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Entry
MF406_07150 CDS
T10482
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
gew Georgenia sp. TF02-10
Pathway
gew03030
DNA replication
gew03430
Mismatch repair
gew03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MF406_07150 (dnaE)
03430 Mismatch repair
MF406_07150 (dnaE)
03440 Homologous recombination
MF406_07150 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gew03032
]
MF406_07150 (dnaE)
03400 DNA repair and recombination proteins [BR:
gew03400
]
MF406_07150 (dnaE)
Enzymes [BR:
gew01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MF406_07150 (dnaE)
DNA replication proteins [BR:
gew03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MF406_07150 (dnaE)
DNA repair and recombination proteins [BR:
gew03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MF406_07150 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
HHH_3
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
UNX55990
LinkDB
All DBs
Position
1585319..1588864
Genome browser
AA seq
1181 aa
AA seq
DB search
MPPGGPEDFVHLHVHTEYSMLDGAAKLDPLFAEVNRIGQRAIAMTDHGYMFGAYDFWSRA
RAAGVKPIIGVEAYLTPGTARADKTRVRWGEDSQAEDDVSARGSYTHMTLLARSTAGMHN
LFRMASLASLDGQMGKAPRMDRELLTTYGEGLIATTGCPSGEVQTRLRLGQYDEAVRAAG
ELQEIFGRENYYVELMNHGLDLETRVTGDLLRLARHLGAPLLATNDSHYVKAEDATTHDA
LLCINSGSTLADPDRFAFTGDTYYVRTAAEMRDLFRDLPEACDNTLLVAEQCDVDFRTTD
QGANYMPRFDVPPGEDEHSWFVKEVERGLHYRFPGGVPDHVRKQAEYEVGVITQMGFPGY
FLVVADFINWAKSRGIRVGPGRGSGAGSMVAYAMRITDLNPLAHGLIFERFLNPDRVSMP
DFDVDFDERRRGEVIDYVTRKYGDDRVAQVVTYGTIKAKQALKDSSRVLGYPFAMGERLS
KAMPPAVGGKDITLAGIFDPADKRYAEAEEFRQLHAGDPEAQKVVTTARGLEGIKRQWGV
HACAVIMSSDPLVDIIPIMRRPQDGAIITQFDYPTCERLGLLKMDFLGLRNLTVIDDALK
NLVVNGKEPVDLERLTLDDPRAYELLGRGDTLGVFQLDGAGMRTLLRLMRPDNFEDISAV
QALYRPGPMGANSHTNYALRKNGQQRIEPIHPELEEPLKEILGTTYGLIVYQEQVMAIAQ
KVAGFTLGQADLLRRAMGKKKKAELDKQYAAFEAGMRERGYSAAAVKTLWDILVPFSDYA
FNKAHSAAYGVVSYWTAYLKANYPTEYMAALLTSTQDNKDRLGLYLGECRHMGITVLPPD
VNTSAADFTPVGQDIRFGLAAIRNVGAHVVRAIIETREQKGEFTSFTDFLDKVPAVVCNK
RTVESLIKAGAFDSLGHTRRALLARHEEAIDAVVDVKRNEAVGQFDLFAGLGSADGAPSF
TVEVPALPEWDKKQKLTFERQMLGLYVSDHPLAGLEHVLQRAADTQIAALLGDEARPDGA
SVHVAGLVTSLQRKMTKNGNPWAIATVEDLTGSIEVLFFPQTFATVSTALVEDTIITVRG
RLNRRDDVPAIAAQEMTLPDVSDAAGGPVSLTMHETRCTGPVVEQLRSVLSNHPGTSEVR
LRLTRGNKAQVVQLADRYRVEPSSALFGDLKALLGPSCLVH
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgccacctggaggacccgaagacttcgtccacctccacgtccacaccgagtactcgatg
ctcgacggcgccgccaagctcgacccgctcttcgccgaggtgaaccggatcggccagcgg
gcgatcgcgatgaccgaccacggctacatgttcggcgcctacgacttctggtccagggcg
cgggcggccggggtcaagccgatcatcggcgtcgaggcgtacctcaccccgggcacggcc
cgggcggacaagacccgggtgcggtggggcgaggactcccaggccgaggacgacgtctcg
gcccgcggctcctacacccacatgacgctgctcgcgcgcagcaccgccggcatgcacaac
ctcttccggatggcctccctcgcctccctggacgggcagatgggcaaggccccccggatg
gaccgcgagctgctcaccacctacggcgaggggctgatcgccaccaccgggtgcccctcc
ggggaggtccagacccggctgcggctgggccagtacgacgaggccgtccgcgccgccggg
gagctgcaggagatcttcggccgggagaactactacgtcgagctgatgaaccacggcctg
gacctggagacccgggtgaccggggacctgctgcgcctggcccgccacctcggcgccccg
ctgctggccaccaacgactcccactacgtcaaggccgaggacgccaccacccacgacgcg
ctgctgtgcatcaactccggctccaccctggccgacccggaccggttcgccttcaccggg
gacacctactacgtgcgcaccgccgccgagatgcgcgacctgttccgggacctgcccgag
gcctgcgacaacaccctgctcgtcgccgagcagtgcgacgtggacttccgcaccaccgac
cagggcgccaactacatgccccgcttcgacgtcccgcccggggaggacgagcactcctgg
ttcgtcaaggaggtcgagcgcggcctgcactaccgcttccccggcggcgtgccggaccac
gtgcgcaagcaggccgagtacgaggtcggcgtcatcacccagatgggcttccccggctac
ttcctcgtcgtcgccgacttcatcaactgggccaagtcccgcggcatccgggtgggcccg
ggccgcggctccggcgccgggtcgatggtggcctacgcgatgcgcatcaccgacctcaac
ccgctggcccacgggctgatcttcgagcggttcctcaacccggaccgggtctccatgccg
gacttcgacgtcgacttcgacgagcgccggcgcggggaggtcatcgactacgtcacccgc
aagtacggcgacgaccgggtcgcccaggtggtcacctacggcaccatcaaggccaagcag
gccctgaaggactcctcccgggtgctcggctaccccttcgccatgggcgagcggctgagc
aaggccatgccgcccgccgtcggcggcaaggacatcaccctggccggcatcttcgacccc
gccgacaagcgctacgccgaggcggaggagttccgccagctccacgccggcgaccccgag
gcgcagaaggtcgtcaccaccgcccgcgggctggagggcatcaagcggcagtggggcgtg
cacgcgtgcgcggtcatcatgtcctccgacccgctggtcgacatcatcccgatcatgcgg
cgcccgcaggacggggcgatcatcacccagttcgactacccgacctgcgagcggctcggg
ctgctgaagatggacttcctcggcctgcgcaacctcaccgtcatcgacgacgcgctgaag
aacctggtcgtcaacggcaaggagccggtggacctggagcggctcaccctggacgacccc
agggcgtacgagctgctcggccgcggggacaccctgggggtcttccagctcgacggcgcc
ggcatgcgcacgctgctgcggctcatgcggccggacaacttcgaggacatctccgccgtc
caggcgctgtaccggcccggcccgatgggggcgaactcccacaccaactacgcgctgcgg
aagaacggccagcagcggatcgagccgatccaccccgagctcgaggagccgctcaaggag
atcctcggcaccacctacggcctgatcgtctaccaggagcaggtcatggcgatcgcgcag
aaggtcgccgggttcacgctcggccaggccgacctgctgcgccgggcgatgggcaagaag
aagaaggcggagctggacaagcagtacgccgccttcgaggccgggatgcgcgagcggggc
tactccgcggcggccgtgaagaccctgtgggacatcctggtcccgttctccgactacgcc
ttcaacaaggcgcactcggcggcgtacggcgtggtgtcctactggacggcgtacctcaag
gccaactacccgaccgagtacatggccgccctgctgacctccacccaggacaacaaggac
cggctcggcctgtacctcggcgagtgccgccacatgggcatcaccgtgctgccgccggac
gtgaacacctccgcggcggacttcaccccggtgggccaggacatccggttcggcctggcc
gcgatccgcaacgtcggggcacacgtggtccgggccatcatcgagacccgggagcagaag
ggggagttcacctccttcaccgacttcctggacaaggtcccggccgtcgtgtgcaacaag
cgcacggtggagtccctgatcaaggccggcgcgttcgactccctcgggcacacccgccgg
gcgctgctcgcccgccacgaggaggccatcgacgccgtcgtggacgtcaagcggaacgag
gcggtgggccagttcgacctcttcgccggcctgggctccgccgacggcgccccctccttc
accgtggaggtcccggccctgcccgagtgggacaagaagcagaagctcaccttcgagcgg
cagatgctcggcctgtacgtctccgaccaccccctcgccgggctggagcacgtgctccag
cgcgccgcggacacccagatcgccgcgctgctcggggacgaggcccgcccggacggggcg
agcgtgcacgtcgccgggctggtgacgtccctgcagcggaagatgaccaagaacggcaac
ccgtgggcgatcgccaccgtggaggacctgaccgggtccatcgaggtgctgttcttcccg
cagaccttcgccaccgtctccacggccctggtcgaggacaccatcatcaccgtccggggc
cggctcaaccgccgcgacgacgtccccgccatcgccgcccaggagatgaccctgccggac
gtctccgacgccgccggcgggccggtgagcctgaccatgcacgagacgcggtgcaccggc
ccggtggtggagcagctgcgctcggtgctcagcaaccaccccggcacctccgaggtccgg
ttgcggctgacccggggcaacaaggcccaggtggtccagctggccgaccggtaccgggtg
gagcccagctcggcgctcttcggcgacctcaaggccctgctcgggccgagctgcctggtg
cactga
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