Georgenia sp. TF02-10: MF406_07210
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Entry
MF406_07210 CDS
T10482
Name
(GenBank) DEAD/DEAH box helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
gew Georgenia sp. TF02-10
Pathway
gew03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gew00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MF406_07210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gew03019
]
MF406_07210
03400 DNA repair and recombination proteins [BR:
gew03400
]
MF406_07210
Enzymes [BR:
gew01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MF406_07210
Messenger RNA biogenesis [BR:
gew03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MF406_07210
DNA repair and recombination proteins [BR:
gew03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MF406_07210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Pribosyltran
ResIII
Cas3-like_C_2
HEM4
B12-binding
Glyco_transf_4
HVO_A0261_N
Pribosyl_synth
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
UNX55999
LinkDB
All DBs
Position
complement(1599296..1601641)
Genome browser
AA seq
781 aa
AA seq
DB search
MSRTDEQQQQATPDEQQQAALRDRAEAALRALVGRDDAVLREDQWTAVEALVAGRRRALV
VERTGWGKSAVYFVATALLREGGAGRPPAGPTVIISPLLALMRDQVAAAGRAGIRAVTIN
SANVTEWEEIHAAIAAGAVDVLLCSPERLNNPAFRDEVLPRLAATAGLVVVDEAHCISDW
GHDFRPDYRRIRTLLGELPPGIPVLATTATANARVSADVAEQLGVGQSGSEVLVLRGSLD
RPSLHLAVLGLPDQPSRVAWLGEQLGRYAGSGIVYTLTVAAAQEVAEQLRAAGHEVRAYT
GQSDPAEREQLEADLKENRVKALVATSALGMGFDKPDLAFVIHLGAPSSPIAYYQQVGRA
GRAVDRADVVLLPGREDQDIWAYFGSLAFPGEAAVRATLAALADGGPLSTARLETQVDLR
RNRLETMLKVLDVDGAVRRVRGGWEATGAPWTYDGERYARVAAAREAEQRAMLAYARLPT
GACRMAYLRDQLDDPELTPGWRCGRCDLCGGLALDAGVDAAALARARAALDRPGVAVAAR
RQWPTGMDALGVPLRGKITEDERAEEGRAVGRLDGLGWSVPLRALFEPARGAAPDPGPGS
GPGKHDPIAEPSPPEPAPPDAAQRRAAQGPGAEAVHGADGLLPMALRRPVQEVLTDWARE
IGAGGGQVDGVVAVGSATRPRLVRHLAQGVGTILGVPVVGAVAPDPQLPPRRHDVNSAQR
LAAVHRRLRLELGEAALAGLPGRTVVLVDDFTDSGWTLAVAARLLRQAGAASVYPFVLAQ
R
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
gtgagccggaccgacgagcagcagcagcaagccaccccggacgagcagcagcaagccgcc
ctgcgggaccgggccgaggcggcgctgcgcgccctggtgggccgcgacgacgccgtcctg
cgggaggaccagtggaccgccgtcgaggccctggtcgccggccggcgccgggccctcgtc
gtcgagcgcaccggctgggggaagtcggccgtctacttcgtcgccaccgcgctgctgcgc
gagggcggggccggccggccgccggccggcccgacggtgatcatctccccgctgctggcg
ctcatgcgggaccaggtggccgccgccggacgggccggcatccgcgcggtgacgatcaac
tcggcgaacgtaaccgagtgggaggagatccacgccgcgatcgcggccggcgccgtcgac
gtcctgctctgctcgcccgagcggctgaacaaccccgccttccgggacgaggtcctcccc
cggctggccgcgacggcgggcctggtggtggtggacgaggcgcactgcatctcggactgg
ggccacgacttccgcccggactaccgccggatccgcaccctgctcggggagctgccgccc
ggcatcccggtgctggccacgacggcgacggcgaacgcccgggtgagcgccgacgtcgcc
gagcagctcggcgtcggccagtccggcagcgaggtgctcgtgctgcgcgggtccctggac
cggccctcgctgcacctggcggtgctgggcctgcccgaccagccgagccgggtcgcctgg
ctgggcgagcagctcggccggtacgccggctccgggatcgtctacaccctcaccgtcgcc
gcggcgcaggaggtcgccgagcagctgcgcgccgcgggccacgaggtccgcgcctacacc
gggcagagcgacccggccgagcgtgagcagctcgaggccgacctgaaggagaaccgggtc
aaggcgctggtcgccacctccgcgctcggcatgggcttcgacaagcccgacctggccttc
gtcatccacctcggcgcgccctcctcgccgatcgcctactaccagcaggtcggccgggcc
gggcgggcggtggaccgggccgacgtcgtgctcctgcccggccgggaggaccaggacatc
tgggcctacttcggctccctcgccttcccgggcgaggcggccgtgcgggccacgctcgcc
gcgctcgccgacggcggcccgctgtccaccgcccggctggagacccaggtggacctgcgc
cgcaaccggctggagacgatgctcaaggtcctcgacgtcgacggcgcggtccggcgggtc
cgcggcgggtgggaggcgaccggggcgccgtggacctacgacggcgagcggtacgcccgg
gtcgcggcggcccgggaggcggagcagcgcgcgatgctggcctacgcccggctgcccacg
ggggcctgccggatggcctacctgcgcgaccagctcgacgaccccgagctcacgccgggc
tggcggtgcgggcggtgcgacctgtgcggcgggctcgccctggacgccggcgtggacgcc
gccgccctcgcccgggcccgggccgcgctcgaccggccgggtgtggcggtggccgcgcgg
cggcagtggcccaccggcatggacgccctcggcgtgccgctgcgcgggaagatcaccgag
gacgagcgggccgaggagggccgcgcggtcggccggctggacggcctgggctggtcggtg
ccgctgcgcgccctcttcgagccggcccgcggcgcggcccccgaccccggacccggctct
ggcccgggcaagcacgacccgatcgcggaaccgtcgccgccggaaccggccccgccggac
gctgcacagcggcgggccgcccagggccccggcgcggaggcggtccacggcgcggacggg
ctgctcccgatggcgctgcgccgcccggtccaggaggtgctcaccgactgggcccgggag
atcggcgccggcggcgggcaggtcgacggcgtcgtcgccgtcggctccgccacccggccg
cggctcgtgcgccacctggcccagggggtgggcaccatcctcggcgtccccgtcgtgggc
gccgtcgcgccggacccgcagctcccgccccgccggcacgacgtcaactccgcccagcgg
ctggccgcggtgcaccgccggctgcggctcgagctcggcgaggccgccctggccggcctg
cccggccggacggtggtgctggtagacgacttcaccgactccggctggacgctggccgtg
gccgcccggctgctccggcaggccggggcggcgtcggtctacccgttcgtcctggcgcag
cggtga
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