Georgenia sp. TF02-10: MF406_13060
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Entry
MF406_13060 CDS
T10482
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
gew Georgenia sp. TF02-10
Pathway
gew03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MF406_13060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gew03000
]
MF406_13060
03400 DNA repair and recombination proteins [BR:
gew03400
]
MF406_13060
Enzymes [BR:
gew01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
MF406_13060
Transcription factors [BR:
gew03000
]
Prokaryotic type
Helix-turn-helix
AraC family
MF406_13060
DNA repair and recombination proteins [BR:
gew03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MF406_13060
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
GH43_C2
Motif
Other DBs
NCBI-ProteinID:
UNX53894
LinkDB
All DBs
Position
2889302..2890861
Genome browser
AA seq
519 aa
AA seq
DB search
MAPQMTFGERYAAISSRDARFDGQFVTAVRSTGIYCRPSCPARTPKPANVTFFPTSAAAH
EAGYRACKRCLPEAAPGSPDWNVRGDVAGRAMRLIVDGVVEREGVPGLAARLGYSSRHLT
RLLAAELGAGPLALARAHRAHTARVLLVGTDLPAADVAFAAGFASVRQFNDTVREVFGMT
PTELRARRRGTPHAPTGIDLALPYREPFDPAGLFAWMGARAVPGVEEGDEASFARTLRLP
HGPAWFRLSHRDGRLRLEARLESLADLSTLVSRARRLFDLDADPVAIDQALARHPELAPH
VAANPGTRLPGTADPHELLIRAMVGQQISVAAARTHLTRLTEALGERVELAGEQRLLFPT
MTAIAERGAEVLRGPAARTRAVTGAAASLAAGDLTLTTGDDATEQRAALMAMPGIGAWTS
DYVRMRVTGDPDVLLTGDVALRAGAARAGIPPGPRELAAWAVRAAPWRSYLSMHLWRLAA
GPAVAVGSAGSTAGPARGQPRQVAPRTSVRLPDPAEEAS
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggccccgcagatgaccttcggcgagcggtacgcggcgatctcgtcgcgcgacgcgcgg
ttcgatgggcagttcgtcaccgccgtgcggtcgacgggcatctactgccggccgtcgtgc
cccgcgcgcacgccgaagccggcgaacgtcaccttcttcccgaccagcgccgccgcgcac
gaggccgggtaccgggcgtgcaagcgatgcctgcccgaggcggcgcccggatcccccgac
tggaacgtgcgcggcgacgtcgccggccgggcgatgcgactcatcgtcgacggcgtggtc
gagcgggagggcgtcccggggctggccgcgcggctggggtactcctcgcgccacctgacg
cggctgctggcggccgagctcggcgccgggccgctcgcgctggcccgcgcgcaccgcgcc
cacacggcgcgggtgctgctggtgggcaccgacctccccgccgccgacgtggcgttcgcg
gcgggcttcgcgagcgtgcgccagttcaacgacaccgtgcgcgaggtcttcgggatgacc
ccgaccgagctgcgcgcgcgtcgccgcggcacgccccacgcacccacgggcatcgacctg
gccctgccctaccgcgagccgttcgaccccgccggcctgttcgcctggatgggcgcgcgc
gccgtgccgggcgtcgaggagggcgacgaagcgtcgttcgcccgcacgctcaggctgccc
cacggcccggcctggttccggctcagccaccgggacgggcggctgcggctggaggcccgg
ctcgagagcctggccgacctgtcgacgctcgtctcgcgcgcccggcgcttgttcgacctc
gacgccgacccggtcgcgatcgaccaggcgctggcgcggcaccccgagctcgcgccgcac
gtggcggcgaaccccggcacccgcctcccggggacggcggacccgcacgagctgctgatc
cgggccatggtcggccagcaaatctcggtcgccgcggcccgcacgcacctgacgcgcctc
accgaggcgctgggcgagcgggtcgagctggccggcgagcagcggctgctgttcccgacc
atgaccgcgatcgccgagcgcggggccgaggtgctgcgcggcccggccgcgcgcacccgg
gcggtcaccggtgccgccgcctcgctcgccgcgggtgatctgacgctgacgaccggcgac
gacgcgacggagcagcgcgccgccctgatggcgatgcccggcatcggcgcgtggacgagc
gactacgtgcggatgcgggtgaccggcgaccccgacgtcctgctcaccggcgacgtcgcc
ctgcgggcgggagccgcccgggcggggatcccgcccgggccccgcgagctcgcggcctgg
gccgtgcgcgccgctccctggcgctcctacctgtccatgcacctgtggcgcctggccgcc
gggcctgccgtcgccgtcggtagcgccggatcgacagcggggccggcccgcggccagccg
cgccaggtcgcaccccgcacgtccgtccggctcccggaccccgccgaggaggcatcatga
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