Georgenia sp. TF02-10: MF406_18290
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Entry
MF406_18290 CDS
T10482
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
gew Georgenia sp. TF02-10
Pathway
gew03030
DNA replication
gew03430
Mismatch repair
gew03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MF406_18290
03430 Mismatch repair
MF406_18290
03440 Homologous recombination
MF406_18290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gew03032
]
MF406_18290
03400 DNA repair and recombination proteins [BR:
gew03400
]
MF406_18290
Enzymes [BR:
gew01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MF406_18290
DNA replication proteins [BR:
gew03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MF406_18290
DNA repair and recombination proteins [BR:
gew03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MF406_18290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
HTH_23
Sigma70_r4_2
HTH_7
Sigma70_r4
HTH_Tnp_ISL3
HTH_28
GerE
DUF4330
HTH_10
HTH_31
Motif
Other DBs
NCBI-ProteinID:
UNX56596
LinkDB
All DBs
Position
unnamed1:63432..65144
Genome browser
AA seq
570 aa
AA seq
DB search
MSRDAFVVRPKSPSRTITVLDMGWVLLILVVVCGIYLATKGASIAPPSKPTQARPPRPSL
FDEVPRGARAGSTARAADSRSRSKAAPARTPTYTREPTAPSATDPRPWSAEGRDIPFAEP
GLRGPLFHYGGTSLRAGSEHHGPFAVIDFETTGLSAERDRIVEVAVARVDADGRVEDEFA
TLVNPQGRDVGPTFIHGITNAQVEKAPRFADVAPEILQRLSGAVVVAHNATFEEAFLARE
LQRAGINISPIPALCTLWLGRQTFATPNHKLSTIARAAGVPLVDKHAALGDVRAVAALLP
QMTSKLRSPVRYAGGPMTWSHNSPAGQLPLVTRAVALRKGTDGWMQSLMARLPTTGLAPN
DAAAEAYLDALAEVLSDGRITGDEAKVLARLAGTAGMGGEQVGALNKRFLDGIKVVALDD
DVLTTAEIRQLKAAAKALALPDYFGELQPTAPPTPGRSDVGALGDPPGGSTMKARVQRGT
RALAMQRAGSSRSDIADALGVSQDTVKSLLRDAKFYDNPPSDPSRLAFARDARRARDAGV
TRDVLRSDRGVSAGKSFEAWRDAAMLADFF
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
gtgagccgcgacgctttcgtcgttcgcccgaaatcgccgtcgcgcacaattacggtgcta
gacatgggttgggtactcctcattctggtcgtcgtctgcggtatctatctcgcgaccaaa
ggcgcatcgattgctcccccgtccaagccgacacaggctcgaccaccacgaccgagcctc
ttcgacgaggtaccccgaggggcgcgagctgggtcaacggcccgtgccgctgactcccgc
agtcgctccaaggcggcacccgccaggacgccgacgtacacgcgagagcccaccgcgccg
agcgccactgacccgcggccatggagcgctgagggccgggacattcccttcgctgagccg
ggcctgcgtgggccgctgttccactacggtggcacgtccctgcgcgcgggctcggagcac
catgggccgttcgctgtcatcgacttcgagacgactggtctctccgcagagcgcgaccga
atcgtcgaagtcgccgtcgcgcgagtcgacgccgatggtcgggtcgaagacgagttcgcg
acgttggtcaaccctcaggggcgcgacgtcggtccgacgttcatccacggcatcaccaac
gcgcaggtcgagaaggcgcccaggttcgctgacgtggcacccgaaattctgcagcgattg
agcggcgctgtcgtagtcgcacacaacgcgaccttcgaggaagcgttcctcgcgagagaa
ctgcagcgcgcgggtatcaacatctctccgatcccggcgctgtgcacgctctggctcggc
cggcagacattcgccacgccgaaccacaagctcagcacgatcgcacgagctgcgggcgtc
ccgctcgtcgacaagcatgccgcactgggcgatgtgcgggcagtggccgcactgctgccg
cagatgacaagcaagttgcggtctccagttcgttacgcaggcgggccgatgacgtggagt
cacaacagcccagccgggcaacttccattggtgacgcgagctgtcgcgctgcgcaaggga
actgacggctggatgcagtctctcatggcgcgtctgcccaccaccgggcttgcaccgaat
gacgctgccgctgaggcgtatctcgacgcgcttgccgaggtactctccgatggacggatc
accggcgatgaggcgaaggtgcttgcgcgtctcgcggggacagccggcatgggcggcgag
caggtaggcgcactgaacaagcgattcctcgacgggatcaaggtcgtagcgctggacgac
gacgtgctcacgaccgcagagatccgtcagctcaaggccgccgcgaaggcgctcgccctt
cccgactacttcggcgagctccagcccacggcgccgccgactcccgggcggagcgatgtc
ggggcgctgggcgacccgccaggagggagcacgatgaaggcacgcgtccagcgtgggaca
cgggctctcgcgatgcagcgtgcaggttcgtcacgcagcgatatcgctgacgcactcggc
gtcagtcaggacaccgtgaagtcactgctccgcgacgcgaagttctacgacaacccaccg
tctgatccctcgcgtctcgcgttcgcccgtgatgctcgccgcgcgcgggatgcgggagtc
acaagagatgtccttcgaagcgaccgcggtgtcagcgcaggtaagagcttcgaggcgtgg
cgcgatgccgcaatgctcgctgacttcttctag
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