Geothrix oryzae: GETHOR_00030
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Entry
GETHOR_00030 CDS
T09137
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
gex
Geothrix oryzae
Brite
KEGG Orthology (KO) [BR:
gex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gex03032
]
GETHOR_00030 (gyrB)
03400 DNA repair and recombination proteins [BR:
gex03400
]
GETHOR_00030 (gyrB)
Enzymes [BR:
gex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
GETHOR_00030 (gyrB)
DNA replication proteins [BR:
gex03032
]
Prokaryotic type
DNA Topoisomerases
GETHOR_00030 (gyrB)
DNA repair and recombination proteins [BR:
gex03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GETHOR_00030 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
BDU67902
UniProt:
A0ABN6UT40
LinkDB
All DBs
Position
2866..5433
Genome browser
AA seq
855 aa
AA seq
DB search
MSEEVFTSRVHTPQESDSYTADNITVLRDLEAVRKRPGMYIGDTDDGSGLHHMVYEVVDN
AVDEALAGFCTRVDVVLHNDGSCSVEDNGRGIPVDIHKEEGRSAAEVIMTVLHAGGKFDN
TSTEGKNAYKVSGGLHGVGVSCVNALSSKLWLTIWKEGQEYAMTFSQGKADAPLKPVGPT
ARRGTRVRFQPDPEVFNNVLDFSFETLSQRLRELSYLNQGVHIRITDERTGDNQDFMNAG
GISSFVEHLNRNKPVLHKPPIYIKDEKQDTTVEVALQWNDSYQETLYCFTNNIRNRDGGA
HLEGFRAAMTRVINAYAEKNNLLKSAKVSLSGEDVREGLTAVLSAKVPDPKFSSQTKDRL
VSSEVKGIVQTIVYEKLSAFFEENPREAKAILEKAIEAARAREAARKARELTRRKGALDG
GGLPGKLADCQEKDPALSEIFLVEGDSAGGSAKQGRHRATQAILPLKGKVLNVEKARFDR
IIGAVELRILIQALGTGIGKDEFKIENLRYHKVVLMTDADVDGAHIRTLLLTFFYRQMPE
LVERGHLYIAQPPLYKVKKGKTEKYLKDERAMEEFLFQKALDGWSLSLPDGTEHRGAVLV
REMKKWGEVQQLFGKLERRGYARPLVRALLAEGLLDEDRFTRREGLEQLAAALVKQKLGT
CEIETIEGEERPAEGEEPAMTTPASHRLRLVRMHLSRPITLWIDSQVAHWGEFRRLAALQ
VELAGFRGGELRLRRLKDIKDVPKDKDGEDEVEVEEGTPKLGKEQVFTDPEEMLAMVLEE
GKRGLGIQRYKGLGEMNPEQLWETTMDPERRTLLQVRVDDAVAADEIFTVLMGDAVEPRR
RFIETNALLAENIDI
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagaagtcttcacctcacgcgtacacactccccaggaatccgacagctacacc
gccgacaacatcacggttctgagagacctcgaggccgtccgcaagcggcccggcatgtac
atcggcgacaccgacgatggcagcggcctgcaccacatggtctacgaggtggtggacaac
gccgtcgacgaggccctggcgggcttctgcacccgcgtggatgtggtgctccacaacgac
ggcagctgcagcgtcgaggacaacgggcgcggcatccccgtggacatccacaaggaagag
ggccgcagcgccgccgaagtgatcatgacggtgctccacgccggcgggaaattcgacaac
accagcaccgagggcaagaacgcctacaaggtgtccggtggcctccacggcgtgggcgtg
tcctgcgtgaacgccctgtcctccaagctctggctcaccatctggaaggagggccaggag
tacgccatgaccttctcccagggcaaggccgacgcccccctgaagcccgtggggcccacg
gcgcggcggggcacccgcgtgcgcttccagcccgaccccgaggtgttcaacaatgtcctc
gacttcagcttcgagaccctcagccagcgactgcgggaactgagctacctgaaccagggc
gtccacatccgcatcacggacgagcgcaccggcgacaaccaggacttcatgaacgccggg
ggcatcagctccttcgtggagcacctgaaccgcaacaagccggtcctccacaagcccccg
atctacatcaaggacgagaagcaggacaccaccgtcgaggtggccctccagtggaacgac
tcctaccaggagaccctctactgcttcacgaacaacatccgcaaccgcgacggcggcgcg
cacctggagggcttccgggccgccatgacccgcgtcatcaacgcctacgccgagaagaac
aacctgctgaagagcgccaaggtgagcctctcgggcgaggatgtccgcgagggcctgacg
gcggttcttagtgccaaagtccctgatcccaaattttccagtcagacgaaggatcgcctc
gtgtccagcgaggtcaagggcatcgtccagaccatcgtctacgagaagctctcggcgttc
ttcgaggagaacccccgggaggccaaggccatcctggagaaggccatcgaggccgcccgc
gcccgcgaggccgcccggaaggcccgcgagttgacccgccgaaagggcgccctcgacgga
ggcggtctgccgggcaagttggcggactgccaggagaaggatccggccctcagcgagatc
ttcctggtggagggcgattccgccggcggcagcgccaagcagggccgccatcgcgccacc
caggccatcctgcccctcaagggcaaggtgctcaacgtggagaaggcccgcttcgaccgc
atcatcggcgccgtggagctccggatcctcatccaggcgctgggcaccggcatcggcaag
gatgagttcaagatcgagaacctccgctaccacaaggtcgtgctgatgaccgacgccgat
gtggacggcgcgcacattcgcaccctgctgctcaccttcttctaccggcagatgccggag
ctggtggagcgcggccacctctacatcgcccagccgcctctctacaaggtgaagaagggc
aagacggagaaatacctcaaggacgagcgcgccatggaggagtttctcttccagaaggcc
ctggacggctggtccctcagcctgccggacggcacggagcaccggggcgccgtcctggtg
cgcgagatgaagaagtggggcgaggtgcagcagctcttcggcaagctggagcgccgcggc
tatgcccgtcccctggtccgtgcgctgctggccgagggcctgctggacgaagaccggttc
acccgcagggaagggctggagcagctggccgccgccctcgtgaagcagaagctcggcacc
tgcgagattgaaaccatcgaaggcgaggagcgccccgccgagggcgaggagcccgcgatg
accacgcccgccagccatcgcctccgcctggtccgcatgcacctgagccgccccatcacc
ctctggatcgacagccaggtggcccactggggcgagttccgccgcctggccgccctgcag
gtcgagctggccggcttccgcgggggcgagctgcggctccgccgcctcaaggacatcaag
gatgtccccaaggacaaggacggcgaggacgaggtcgaggtcgaggagggcacccccaag
ctcggcaaggagcaggtgttcacggatcccgaggagatgctggccatggtcctcgaggag
ggcaagcgggggctcggcatccagcgctacaagggcctgggcgagatgaaccccgagcag
ctctgggagaccaccatggatcccgagcgccgcaccctgctgcaggttcgggtggacgat
gcggtggcagccgacgagatcttcaccgtcctcatgggtgatgccgtggaaccccgacgc
cgcttcatcgagaccaacgccctcctggcggagaacatcgacatctaa
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