Geothrix oryzae: GETHOR_00040
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Entry
GETHOR_00040 CDS
T09137
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
gex
Geothrix oryzae
Brite
KEGG Orthology (KO) [BR:
gex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gex03032
]
GETHOR_00040 (gyrA)
03400 DNA repair and recombination proteins [BR:
gex03400
]
GETHOR_00040 (gyrA)
Enzymes [BR:
gex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
GETHOR_00040 (gyrA)
DNA replication proteins [BR:
gex03032
]
Prokaryotic type
DNA Topoisomerases
GETHOR_00040 (gyrA)
DNA repair and recombination proteins [BR:
gex03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GETHOR_00040 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
ABC_tran_CTD
Motif
Other DBs
NCBI-ProteinID:
BDU67903
LinkDB
All DBs
Position
5488..8094
Genome browser
AA seq
868 aa
AA seq
DB search
MNPNRIEPLEIEKEMRKSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMKEAGNDWNRA
YKKSARTVGDVMGKYHPHGDSAIYDTLVRMAQPFSMRHVLVDGQGNFGSIDGDSAAAMRY
TEARLSRLANEMMGDIDQDTVDFGPNYDGSMQEPLTLPARFPNLLVNGSQGIAVGMATSI
PPHNLRECCHALVDLIDQPSLGLEGLMAHIKAPDFPGGGIMLGTEGVLDAYRTGRGRCVV
RAKSHVEQIRRAGDREQLVFTELPYQVNKATLIEKIAELVREKKIDGISDLRDESDREGI
RLVVELKKNEPSDIVLNQLYQQTQLQNSFPITMLAIVNGQPRICTLREVLQEFIGFRREV
VTRRTLFQLRKAEDRHHVLMGLKIALDHLDAVIKLIRGAKSPEEAKAGLMAGAFATAAAL
KKDPSLCLSAVQAQAILDMRLQRLTGLEREKILDELAELEKQIAKLKAILADDKLLLQVI
KEELQQVADQFGNDRRTEIVGYSGEIRMEDVVPDDPMVVTMSKAGYIKRTDLTAYRRQRR
GGKGKVGMKTKDEDFVEQLFMTKAHDTLMAFTDKGIVYALKVYDLPEAAASTRGKHIRNL
ISLKDGENVVTLMALRDFPEGETLVFATSDGTVKKSSLAAYANIRTNGLIALNIDDGNSL
VAVRRSTGTQQIVLATAQGKAIRFPEEDVRATGRATTGVRGMKLAKGDHIVDMEVAEPLP
DLPEGVEPDESTEDHGMLLTVCEKGYGKRSLLQDYRLQGRGGTGVINIRAGVRNGQVVGF
KLVKPGEGCLLISQEGMVIRFLIDEVRKTGRNAQGVSLLKLASAEDRVVGLAKIDASAMA
LDEEEDLVEVEAAHPGPDENGEQPKLGL
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgaaccgtatcgaacccctggaaatcgaaaaagaaatgcggaagtcctacctg
gactacgccatgagcgtcatcgtgggccgggccctgcccgatgtccgcgacggcctcaag
ccggtgcaccgccgggtgctgttcgccatgaaggaggccggcaacgactggaaccgggcc
tacaagaagtccgcccgcaccgtgggcgatgtgatgggtaagtaccatccccatggcgac
tccgccatctacgacaccctcgtccgcatggcccagcccttctccatgcgccatgtgctg
gtggacggccagggcaacttcggctccatcgacggcgactccgcggcggccatgcgctac
accgaggcccgcctgtcccgcctcgccaacgagatgatgggcgacatcgaccaggacacg
gtggatttcggccccaactacgacggcagcatgcaggagcccctgaccctgccggcccgc
ttccctaacctcctggtgaacggctcccagggcatcgccgtgggcatggccaccagtatc
cccccgcacaacctgcgggagtgctgccacgccctggtggacctgatcgatcagccgagc
ctgggcctcgagggcctcatggcccacatcaaggctcccgacttcccgggcggcggcatc
atgctgggcaccgagggggtgctggacgcctaccgcacgggccgcggccgctgcgtggtg
cgcgccaagtcccatgtggagcagatccggcgggccggtgaccgcgagcagctggtcttc
acggagctgccctaccaggtgaacaaggccaccctcatcgagaagatcgccgaactggtg
cgcgagaagaagatcgacggcatcagcgacctgcgggatgaatccgaccgcgagggcatc
cgcctcgtcgtcgagctgaagaagaacgaacccagcgacatcgtcctgaaccagctctac
cagcagacccagctccagaacagcttccccatcaccatgctggccatcgtgaacggccag
ccccggatctgcaccctgcgggaggtgttgcaggagttcatcggcttccgccgcgaggtg
gtgacgcgccggaccctgttccagctgcgaaaggccgaagaccgccaccatgtcctcatg
ggcctcaagatcgccctggaccacctggacgcggtcatcaagctcatccgcggcgccaag
agccccgaggaggccaaggccggcctgatggccggggccttcgccaccgccgccgccctc
aagaaggaccccagcctctgcctgtccgccgtgcaggcccaggccatcctggacatgcgc
ctccagcgcctcacggggctggagcgcgagaagatcctcgacgagctggccgagctcgaa
aagcagatcgccaagctcaaggccatcctcgccgacgacaagctgctcctgcaggtcatc
aaggaggagctgcagcaggtggccgaccagttcggcaacgaccgtcgcaccgagatcgtg
ggctactccggcgagatccgcatggaggatgtggtgccggacgaccccatggtcgtcacc
atgtccaaggcgggctacatcaagcgcaccgacctcaccgcctaccgccgccagcggcgc
ggcggcaagggcaaggtgggcatgaagaccaaggacgaggatttcgtcgagcagctcttc
atgaccaaggcccacgacaccctgatggctttcacagacaagggcatcgtgtacgccctc
aaggtttacgacctgccggaagccgccgcctccacccggggcaagcacatccgcaacctc
atctccctgaaggacggggagaatgtcgtgaccctcatggccctgcgggacttccccgag
ggcgagaccctggtcttcgccaccagcgacggcacggtgaagaagtccagcctggcggcc
tacgccaacatccggaccaatggcctcatcgccctcaacatcgatgacggcaacagcctg
gtggccgtgcgccgctccacgggaacccagcagatcgtcctggccacggcccagggcaag
gccatccgcttccccgaagaggatgtccgcgccaccggccgcgccaccacgggcgtgcgg
ggcatgaagctggccaagggcgaccacatcgtggacatggaagtggccgagcccctgccg
gacctgccggagggcgtggagcccgacgagagcaccgaggatcacggcatgctgctcacg
gtctgcgagaagggctacggcaagcgcagcctcctccaggactaccgcctccaggggcgc
ggcggcacgggcgtcatcaacatccgcgccggcgtccgcaacgggcaggtggtgggcttc
aagctcgtcaagcccggcgagggctgcctcctcatcagtcaggaggggatggtcatccgc
ttcctcatcgacgaggtccgcaagacgggccgcaatgcccagggcgtcagcctcctcaag
ctggccagcgccgaggaccgcgtcgtgggcctcgccaagatcgacgccagcgccatggcc
ctggacgaagaggaggatctcgtcgaagtcgaggcggctcacccggggccggacgaaaac
ggcgagcagccgaaactggggctgtag
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