Geothrix oryzae: GETHOR_00070
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Entry
GETHOR_00070 CDS
T09137
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
gex
Geothrix oryzae
Pathway
gex00260
Glycine, serine and threonine metabolism
gex00460
Cyanoamino acid metabolism
gex00630
Glyoxylate and dicarboxylate metabolism
gex00670
One carbon pool by folate
gex00680
Methane metabolism
gex01100
Metabolic pathways
gex01110
Biosynthesis of secondary metabolites
gex01120
Microbial metabolism in diverse environments
gex01200
Carbon metabolism
gex01230
Biosynthesis of amino acids
gex01240
Biosynthesis of cofactors
gex04981
Folate transport and metabolism
Module
gex_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
gex00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
GETHOR_00070 (glyA)
09102 Energy metabolism
00680 Methane metabolism
GETHOR_00070 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
GETHOR_00070 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
GETHOR_00070 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
GETHOR_00070 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
GETHOR_00070 (glyA)
Enzymes [BR:
gex01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
GETHOR_00070 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
B12-binding
Motif
Other DBs
NCBI-ProteinID:
BDU67906
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All DBs
Position
complement(10641..11879)
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AA seq
412 aa
AA seq
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MYEVIRTSDPAVFQALELEVQRQRHHLELIASENYASRAVMQAMGSHFTNKYAEGYPGKR
YYGGCSQVDIVENLARDRAKQIFGAEHANVQPHSGAQANMAVYLAALKPGDTVMGLDLAH
GGHLTHGHPLNSSGILYKFVPYHVRQEDERVDMDEVRTLARQHQPKMIVVGASAYSRTWN
FPLFREICDEVGALLMVDMAHIAGLVATGHHPSPVPHADYVTTTTHKTLRGPRGGLILCK
SQYAKDLDRAVFPGVQGGPLMHVIAAKAVALHEIMQPEFKAYSGQVICNAHALAKGLQER
GWRIVSGGTDNHLFLVDLRDHELLGHEAENCLHRAGMTTNKNGIPFDPNPPLKPSGVRLG
SPALTTRGMKEAEMDQIARFFDVTLRHRGDESTFARVRQEVFHLTDQFPIPE
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaagtcatccgaacctccgaccccgccgtgttccaggccctcgagctggaggtg
cagcgccagcggcaccacctggaactcatcgcgtcggaaaactacgcctcccgcgccgtc
atgcaggccatgggctcccacttcaccaacaagtacgcggaaggctatcccggcaagcgc
tactacggcggctgcagccaggtggacatcgtcgagaacctggcgcgcgaccgggccaag
cagatcttcggcgccgagcatgccaatgtgcagccccacagcggcgcccaggccaacatg
gccgtctacctcgcggccctgaagcccggcgacaccgtgatgggcctggatctggcccac
ggcggccacctcacccacggccaccccctgaacagctccggcatcctctacaagttcgtg
ccctaccatgtgcgccaggaagacgagcgggtggacatggacgaggtccgcaccctggcg
cggcagcaccagcccaagatgatcgtcgtgggcgcctcggcctacagccgcacctggaac
ttccccctcttccgcgagatttgcgacgaagtgggcgccctgctcatggtggacatggcc
cacatcgccggcctggtggccacgggccaccatccgagccccgtaccgcacgcggattat
gtcaccaccaccacccacaagaccctgcggggcccccgcggcggtctgatcctctgcaag
tcccagtacgccaaggaccttgaccgcgcggtcttcccgggcgtccagggcggtccgctc
atgcatgtcatcgccgccaaggcggtggccctgcacgagatcatgcagcccgagttcaag
gcctacagcggccaggtcatctgcaacgcccacgccctggccaagggcctgcaggagcgc
ggctggcgcatcgtcagcggcggcacggacaaccacctgttcctggtggatctgcgcgac
cacgagctgctgggccacgaggccgagaactgcctgcaccgggccggcatgaccaccaac
aagaacggcatccccttcgaccccaacccgcccctcaagccctcgggcgtgcgcctgggc
agtcccgccctcaccacgcgcggcatgaaggaggcggaaatggatcagatcgcccgcttc
ttcgatgtcaccctgcggcatcgcggcgatgaaagcaccttcgcccgcgtccggcaggaa
gtcttccacctcaccgatcagttccccatccccgaataa
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