Geothrix oryzae: GETHOR_00610
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Entry
GETHOR_00610 CDS
T09137
Name
(GenBank) ABC transporter ATP-binding protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
gex
Geothrix oryzae
Pathway
gex02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gex00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GETHOR_00610
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gex02000
]
GETHOR_00610
Enzymes [BR:
gex01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
GETHOR_00610
Transporters [BR:
gex02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
GETHOR_00610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA
AAA_16
AAA_22
ABC_ATPase
Zeta_toxin
RsgA_GTPase
AAA_29
AAA_28
Motif
Other DBs
NCBI-ProteinID:
BDU67960
LinkDB
All DBs
Position
complement(66467..68275)
Genome browser
AA seq
602 aa
AA seq
DB search
MSRILRFFRDHLRPHAPLIAGASLLLLLAGLCQGALIASIKFVFDDGKAHALQAAQPGLF
GQLEHLRAWAMARLPEASALRSGGLLVPLVLVSLFALKGLFTYSGTLLMVRSGILATQAL
RERLFAHLLIQEPAFFQKHPVGELLTRSISDVGAVQGIASNQLAEAVREICVALTMLATV
LYMDWKLSLTLFLAGPLVVLPVKRLSQRIRKVNHRNQEASSRLLQRLKEVFSNIRVVQAF
ARESYEVQRFRIQNLELFRLGMKSARASALSTPIMELVGGFLLAFLAAYASGRFKAGTLT
TENFLTYILAIYALYDPLRRLTKLNNEMQVASASLDRVYSMLDRMPELPVSPNPKPMPAH
PDLLRFEGVEFAYDDKHPVLRGIDLEIHSGETVALVGGSGGGKTTLVNLVPRFFDPTAGC
ITLDGIDLRDFDPRDLRKAIGIVTQETLLFMDTVHDNIAYGLHASREAVIEAAKKAHAHD
FVAALPKGYDTPLAETGSSLSGGQRQRLAIARALLHDPPILILDEATSALDTESERAVQA
ALETLMQNRTTLVIAHRLSTIQRATRICALKRGQIVEQGTHDELLARHGEYARLHKLQFA
EA
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgcattctccgcttcttccgggaccacctccgcccccacgcccccctcattgcg
ggggcctcgctgctcctgctcctggcggggctctgccagggcgctctcatcgcttccatc
aagttcgtcttcgacgatggcaaggcccacgccctgcaagccgcccagccgggcctcttc
gggcagctggaacacctgcgcgcctgggccatggcccgcctcccggaggcctcggccctg
cggagcggcggcctgctggtgcccctcgtgctcgtgtcgctcttcgccctgaagggcctc
ttcacctacagcggcaccctgctgatggtgcgcagcggcatcctcgccacccaggccctg
cgcgagcgcctgttcgcccacctgctgatccaggagcccgccttcttccagaagcacccg
gtcggcgagctgctgacccgcagcatcagcgatgtgggcgccgtccagggcatcgccagc
aaccagctggcggaggccgtccgcgaaatctgcgtggccctcaccatgctggccacggtc
ctctacatggactggaagctgagcctcaccctcttcctcgccggtcccctggtggtcctg
cccgtgaaacggctcagccagcgcatccgcaaggtgaaccaccggaaccaggaggcctcc
agccgcctgctccagcgcctcaaggaagtcttcagcaacatccgggttgtgcaggccttc
gcccgggagtcctacgaggtccaacggttccggatccagaacctcgagctgttccgcctg
ggcatgaagagcgcccgcgcctcggccctctccacgccgatcatggagctggtgggcggg
ttcctgctggccttcctcgccgcctacgcctcggggcgcttcaaggccggcaccctcacc
accgagaacttcctcacctacatcctggccatctacgccctctacgaccccctgcggcgg
ctcaccaagctcaacaacgagatgcaggtcgcctccgccagcctggatcgcgtctacagc
atgctcgaccggatgcccgagctccctgtgagcccgaatccgaagcccatgcccgcccat
cccgacctgctgcgcttcgagggcgtcgaattcgcgtacgacgacaagcacccggtgctc
cgcggcatcgacctggagatccactccggcgagaccgtggccctggtgggcggcagcggc
ggcggcaagaccaccctggtgaacctcgtgccccgcttcttcgatcccaccgcggggtgc
atcaccctcgacggcatcgacctgcgcgacttcgacccccgcgacctgcggaaggccatc
ggcatcgtcacccaggagaccctgctcttcatggacacggtgcacgacaacatcgcctac
ggactgcatgccagccgcgaggccgtcatcgaggccgcgaagaaggcccatgcccacgat
ttcgtcgcggccctgcccaagggctacgacacgcccctggccgagacgggttccagcctg
agcggcgggcagcgccagcgcctcgccatcgcccgggccctgctgcacgatccccccatc
ctcatcctggacgaggccaccagcgccctcgacaccgagagcgaacgcgccgtgcaggcc
gccctcgaaaccctcatgcagaaccgcaccaccctggtgatcgcccaccgcctgagcacc
atccagcgcgccacccgcatctgcgccctgaagcggggccagatcgtcgaacagggcacc
cacgacgagcttctcgcccgccacggcgagtacgcgcgcctgcacaagctgcagttcgcg
gaggcatga
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