Geothrix oryzae: GETHOR_00680
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Entry
GETHOR_00680 CDS
T09137
Symbol
rnc
Name
(GenBank) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
gex
Geothrix oryzae
Brite
KEGG Orthology (KO) [BR:
gex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gex03019
]
GETHOR_00680 (rnc)
03009 Ribosome biogenesis [BR:
gex03009
]
GETHOR_00680 (rnc)
03036 Chromosome and associated proteins [BR:
gex03036
]
GETHOR_00680 (rnc)
Enzymes [BR:
gex01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
GETHOR_00680 (rnc)
Messenger RNA biogenesis [BR:
gex03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GETHOR_00680 (rnc)
Ribosome biogenesis [BR:
gex03009
]
Eukaryotic type
90S particles
RNase
GETHOR_00680 (rnc)
Prokaryotic type
rRNA processing factors
GETHOR_00680 (rnc)
Chromosome and associated proteins [BR:
gex03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
GETHOR_00680 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
BDU67967
UniProt:
A0AA48GI56
LinkDB
All DBs
Position
complement(74045..74752)
Genome browser
AA seq
235 aa
AA seq
DB search
MTTARRPDSLSDLEARLGHPFADRALLQEALTHISASKGRDNQRLEFLGDALLNFAVAFL
LHRERPDWQEGPMSKFRGVLVRTDSLHEWALDLGLDRALTATHPRKAPPMGPKPLADALE
AILAALFLDAQASGQDGTAVVLALVEARFLGPIRSAAPEAWARLDPKTTLQETAARLGRP
APVYTQVSQSGPGHAPRFTVRAEVGALQAEACGPSRKRAEGDAARRLLDLLTGST
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
ttgaccacggcccgacgccccgacagcctgagcgatctggaggcccggttgggccacccc
tttgcggaccgcgccctgctccaggaggcgctgacccacatttccgcctccaagggccgg
gacaaccagcgactggagttcctgggggacgccctcctcaatttcgccgtggcgttcctg
ctgcaccgggagcgcccggactggcaggagggtcccatgagcaagttccgcggcgtcctc
gtgcgcacggactcgctgcacgagtgggccctcgacctgggcctggaccgcgccctcacc
gccacccacccgcgcaaggccccgcccatggggcccaagcccctggccgacgccctggag
gccattcttgcggccctgttcctggatgcccaggcctcgggccaggatggtacggccgtc
gtcctggccctggtggaggcgcggttcctcgggcccatccggtccgccgcccccgaggcc
tgggcccggctggatcccaagaccaccctgcaggagacggccgcccgcctgggccgcccc
gcgcccgtctacacccaggtgtcccagtcgggcccgggccacgcgccgcgcttcacggtg
cgcgccgaggtgggcgcgctccaggccgaggcctgtggcccctcccgcaagcgggccgaa
ggggatgccgcccggcggctcctggatctgctcacgggatccacatag
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