Geothrix oryzae: GETHOR_01880
Help
Entry
GETHOR_01880 CDS
T09137
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
gex
Geothrix oryzae
Pathway
gex00550
Peptidoglycan biosynthesis
gex01100
Metabolic pathways
gex01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
gex00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GETHOR_01880 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GETHOR_01880 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gex01011
]
GETHOR_01880 (mrdA)
Enzymes [BR:
gex01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
GETHOR_01880 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
gex01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
GETHOR_01880 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
DUF1485
Motif
Other DBs
NCBI-ProteinID:
BDU68087
UniProt:
A0AA48GIC7
LinkDB
All DBs
Position
229460..231367
Genome browser
AA seq
635 aa
AA seq
DB search
MDPRQRPTLDRRLGVFKALAWGLVALLVLIYAWLQLVRHGEFKQLALQQAVKVRPIAAPR
GLVLDRNGHRLVDNRRALHLVVQREDLPARAEVVEALAQALELDPAALARKIQIYRTAGK
GRPLVLKENLDEAGIALAERVRARFPFLSVEVAPRRVYLGDELAGHALGYVGEVDEELMK
AKPGLFRLGETIGKEGFEASGNDRLKGVDGQKRILVDQLGMEVANFGQEDATAGRSLFLT
LDAGLQKIMQDAYGEEAGAAVVLDLRDGGILAMYSSPSYDPNLFLNRLSQDMVDRYLNNP
TRPMVNRAIQGIYAPGSTFKLLVALAALEKGIATPQTAVYCAGKKNYYGRDFRCDKPTGH
GSLSMVQAIAQSCDVYFYELASRMDIDDIYATAEKYGLTERTGIDLPREKRTRIPSRAWK
RKALPKDPKWYAGETISVGIGQGAVGVTPIGLARFYALLGTRGKLVTPHLFYGFRGDQTN
ALEPAAAPPFKDTPLDPKHWAVLDEGLREVVQGGTAGANPFIREIAKLIPFSGKTGTAQV
ATFVDKAHYARQAKKFKDHALFAGYAPADRPQIAFAVVVENAGFGSTAAAPIAAKLVKYW
FMDRLSNPLPPPRGRMVDPFAPATTPAAPAVEGAE
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggacccccggcagcgcccgaccctggaccggcgcctgggcgtgttcaaggccctggcc
tggggcctggtggccctgctggtgctgatctacgcctggctgcagctggtgcggcacggc
gagttcaagcagctggccctccagcaggcggtgaaggtgcgccccatcgccgcgccccgc
ggcctggtgctggaccgcaacggccatcgactggtggacaatcgccgggcgctccacctg
gtggtccagcgcgaggacctgcctgcgcgggcggaggtggtggaggccctggcccaggcg
ctggagctggatcccgccgccctggcccggaagatccagatctaccgcaccgccggcaag
gggcggcccctggtgttgaaggagaacctggacgaggcgggcatcgcgctggcggagcgg
gtccgcgcccgcttccccttcctcagcgtggaagtggcgccccgccgggtgtatctcggg
gacgagctggcgggccacgcgctgggctatgtgggggaagtggacgaagagctgatgaag
gccaaacccgggctcttccgcctgggcgagaccatcggcaaggagggcttcgaggccagc
ggcaatgaccgtctgaagggcgtggacggccagaagcggatcctggtcgatcaactcggc
atggaagtggcgaatttcggccaggaggacgccacggccggccggagcctctttctcacg
ctggatgcgggcctccagaagatcatgcaggatgcctacggcgaggaggccggcgccgcc
gtggtgctggacctgcgggacgggggcatcctggcgatgtattccagcccctcgtacgac
ccgaacctgttcctcaaccggctcagccaggacatggtggaccgctacctgaacaacccc
acgcgccccatggtgaaccgggccatccagggtatctacgccccgggctccaccttcaag
ctgctggtggccctggcggccctggagaagggcatcgccacgccccagacggcggtctac
tgcgcgggcaagaagaactactacggccgcgacttccgctgcgacaagcccacgggccac
ggcagcctctccatggtgcaggccatcgcccagagctgcgatgtctacttctacgagctg
gcctcgcgcatggacatcgatgacatctacgccacggcggagaagtacgggctgaccgag
cgcacgggcatcgacctgccccgcgagaagcggacccgcatccccagccgggcctggaag
cgcaaggccctgcccaaggaccccaagtggtacgcgggcgagaccatcagcgtgggcatc
ggccagggggccgtgggcgtgacgcccatcggcctggcgcgtttctacgcgctcctgggc
acccgtggcaagctcgtcaccccgcatctgttctacggcttccgcggagaccagaccaat
gcgctggagcccgcggccgcgccccccttcaaggacacccccttggatccgaagcactgg
gcggtgctcgacgagggtctccgcgaggtggtgcagggcgggacggccggcgccaatccc
ttcatccgcgagatcgccaagctgattcccttctcggggaagaccggcacggcccaggtg
gccaccttcgtcgacaaggcccactacgcgcggcaggcgaagaagttcaaggaccacgcc
ctcttcgcggggtacgcgcccgcggaccgcccccagatcgccttcgcggtggtggtggag
aacgcgggcttcggttccacggccgccgcccccatcgcggcgaagctcgtgaagtactgg
ttcatggatcgcctcagcaaccccctgccgccgccgcggggccgcatggtggatcccttc
gccccggcgacgacgccggccgcgcccgcggtcgagggggcggaatga
DBGET
integrated database retrieval system
