Geothrix oryzae: GETHOR_01980
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Entry
GETHOR_01980 CDS
T09137
Symbol
carH
Name
(GenBank) HTH-type transcriptional repressor CarH
KO
K22491
MerR family transcriptional regulator, light-induced transcriptional regulator
Organism
gex
Geothrix oryzae
Brite
KEGG Orthology (KO) [BR:
gex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gex03000
]
GETHOR_01980 (carH)
Transcription factors [BR:
gex03000
]
Prokaryotic type
Helix-turn-helix
MerR family
GETHOR_01980 (carH)
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Gene cluster
GFIT
Motif
Pfam:
MerR_1
B12-binding_2
B12-binding
MerR
HTH_17
Motif
Other DBs
NCBI-ProteinID:
BDU68097
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Position
241628..242476
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AA seq
282 aa
AA seq
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MGKVEPDLLSIGDICSETGLSADVVRVWERRYGFPMPLRLPSGHRRYRREDLHRLRLMAE
AVAQGHRPAVVARSSEADLKRLLVPEGHPVVEALFLAVVAMDTEGIRRLLREALVRLPWK
PFLQQVVSPLLDRVGMAWADGSLGVHQEHLLTEILEDFLRELRQGCQPRPGQGIVLLATL
PGERHRLGLLMAALAYAAAGLRTELLGVDLPVASIAHAARTLKVDRVAVSLSIQSSGETA
RRLLMDLKDRLPRECRLLIGGQGAARTRKIEGVERRSGLEVS
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaagtggaaccggacctgctgagcatcggggacatctgctcggagacgggcctc
tcggccgatgtggtgcgggtgtgggagcgccgctacggcttccccatgcccctccggctg
ccttccggccaccgccgctaccggcgggaggacctccaccgcctgaggctcatggccgag
gcggtggcccaggggcaccggccggccgtggtggcccggtcctcggaagcggacctgaag
cgtctgttggtccccgaaggccaccccgtggtggaggcgctgttcctggcggtggtggcc
atggatacggagggcatccggcgcctgctgcgggaggccctggtccggctgccctggaag
cccttcctccagcaggtggtgtcgccgctgctggaccgggtgggcatggcctgggccgac
gggagcctcggcgtccatcaggagcacctgctcacggagatcctcgaagacttcctccgg
gagctgaggcagggctgtcagccccggcccggccaggggatcgtgctgctggccaccctg
cccggcgaacgccaccggctggggctgctcatggcggccctggcctatgccgccgcgggc
ctgcgcacggagctgctgggggtggacctacccgtggccagcatcgcccacgcggcccgc
accctgaaggtggaccgcgtggcggtgagcctgtccatccagagttccggggagaccgcc
cggcgtctcctcatggacctgaaggaccgactgccccgggagtgccggctgctcatcggc
gggcagggcgcggcgcggacccggaagatcgaaggggtggagcgccggtcggggctcgag
gtgagctag
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