Geothrix oryzae: GETHOR_04290
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Entry
GETHOR_04290 CDS
T09137
Symbol
yhaM
Name
(GenBank) HD family phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
gex
Geothrix oryzae
Brite
KEGG Orthology (KO) [BR:
gex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gex03019
]
GETHOR_04290 (yhaM)
Messenger RNA biogenesis [BR:
gex03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GETHOR_04290 (yhaM)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
HDOD
Cas3_HD
TraI_2
Motif
Other DBs
NCBI-ProteinID:
BDU68328
UniProt:
A0ABM8DN19
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All DBs
Position
492245..493231
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AA seq
328 aa
AA seq
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MSDQQSIRQLKEGDAVLGFLLAQEAAYKISAKGSEYLELKLADASGDLKAFLWDVRAIEG
DMEAIRADAFLWVKGSVTSYNGRLQLKLDKVRFAADAEVGDFSRFFPVSARPVPEMLEEL
DGLLASVKDPWIGRLLSDLFVADAELRAAFAQAPAAKSMHHVCLGGLLEHTLSVAGMAEH
ACGHYGNLNRDLVLAGVLLHDVGKTAELSYQRSFGYTDAGNLLGHIAMEAEWISRAAGRI
PGFPEELRLQILHIVLSHHGRLEFGSPVLPKTPEALLVHYLDDLDGKLEVMFRAQRDETG
GGAWSPFSRALERMIYRRRWSAVGDVEN
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatcagcagagcatccggcaattgaaggagggcgatgccgtcctgggctttctc
ctggcccaggaagccgcctacaagatcagcgccaagggcagcgagtacctcgaactgaag
ctggcggacgcctccggcgacctgaaggccttcctctgggatgtgcgcgccatcgagggc
gacatggaggccatccgcgccgacgcgttcctgtgggtgaagggctcggtgacgagctac
aacggccggctccagctgaagctcgacaaggtgcgtttcgcggcggatgcggaggtgggc
gacttctcccggttcttccccgtcagcgcccggcccgtgccggagatgctcgaggagctc
gacgggctcctcgcctcggtgaaggatccctggatcggccggctgctgtcggacctcttc
gtggcggatgcggagctgcgggccgccttcgcccaggcgccggccgccaagtccatgcac
catgtctgcctgggcggcctgctggagcacaccctgtccgtggcgggcatggccgagcac
gcctgcgggcactacgggaacctgaaccgcgacctggtcctggcgggtgtgctgttgcac
gatgtggggaagacggccgagctcagctatcagcggagcttcggctacaccgatgcgggg
aacctgctgggccacatcgccatggaggcggagtggatcagccgcgccgcgggccggatc
cccggattccccgaggagttgcgcctgcagatcctgcacatcgtcctcagccaccacggc
cgcctggaattcggctcccccgtgctgcccaagacgccggaagccctgctcgtccactac
ctggatgacctggacggcaagctggaagtcatgttccgcgcccagcgggacgagacgggg
ggaggagcctggagccccttcagccgggccctggagcgcatgatctaccgacggcgatgg
tccgcggtgggggatgtcgaaaattga
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integrated database retrieval system
