Geothrix oryzae: GETHOR_04450
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Entry
GETHOR_04450 CDS
T09137
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
gex
Geothrix oryzae
Brite
KEGG Orthology (KO) [BR:
gex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gex03009
]
GETHOR_04450 (rimO)
Enzymes [BR:
gex01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
GETHOR_04450 (rimO)
Ribosome biogenesis [BR:
gex03009
]
Prokaryotic type
ribosomal protein modification factors
GETHOR_04450 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
AHD
Motif
Other DBs
NCBI-ProteinID:
BDU68344
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All DBs
Position
complement(511183..512565)
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AA seq
460 aa
AA seq
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MTKVGFMSLGCPKNLVDSEVMLGHLRLKGYQITPVLEEAQVLVVNTCGFIDAAKQESVEA
ILQAASMKKEGACQKLIVAGCLVERYRDELMAEMPEIDACLGTRDIEQIAEVIGAGAAFE
LNPNPDYLYTEQSPRMLTTPKASAYLKISEGCDHACAFCVIPRLRGGQRSRSVESVVAEA
RNLVAQGVLEISLVGQDTTDYGRDFGDPDALEKLVRALGQVEGLRWFRIHYAYPNRLTDG
LLHAIAETPNCARYLDMPLQHADAAILKAMARGGSRAQFLKLLEKVRRIVPGIAIRSNFI
VGFPGEDDAAFEELKAFVKEARFDHVGVFTYSPEEGTSAFGLGDPIPKRTKESRKRRILE
LQQKIAREKNQEKVGQVIEVLVEGAHEETDLLVKGRHAGQAPDIDGNVLLVDGAPQVNTI
QKVRIVKAHAYDLIGEVEEGGLEASTAAYETAFKARSSTR
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
ttgaccaaagtcggtttcatgtccctgggctgccccaagaacctggtggattcggaagtc
atgctgggccacctgcggctcaagggctaccagatcacccccgtgctggaggaggcccag
gtgctggtggtgaacacctgcggcttcatcgacgccgccaagcaggagagcgtcgaggcc
atcctccaggccgcctccatgaagaaggagggggcctgccagaaactcatcgtggccggc
tgcctggtggagcggtaccgcgacgagctcatggctgagatgccggagatcgacgcgtgc
ctgggcacccgggacatcgagcagatcgccgaggtgatcggcgctggagccgccttcgag
ctgaatcccaaccccgactacctctacaccgagcagagccctcggatgctcaccacgccc
aaggccagcgcctacctgaagatcagtgaaggctgcgaccacgcctgcgccttctgcgtc
atcccccggctccgcggtggccagcgcagccgcagcgtcgagagcgtcgtggccgaggcc
cggaacctcgtggcccagggtgtcctcgagatcagcctcgtggggcaggacaccacggac
tacggtcgcgacttcggcgatcccgatgccctggagaagctggtccgcgccctgggccag
gtggagggcctccgctggttccgcatccactacgcctacccgaaccgcctcacggacggc
ctgctgcatgccatcgccgagacgccgaactgcgcccgctatctggacatgccgctgcag
cacgcggacgcggccatcctcaaggccatggcccgcggcggcagccgcgcccagttcctg
aagctgctcgagaaggtgcgccgcatcgtgccgggcatcgccatccggtccaacttcatc
gtgggcttccccggcgaggacgacgccgccttcgaggagctgaaggccttcgtgaaggag
gcccgcttcgaccatgtgggcgtcttcacctacagccccgaggaggggacttccgccttc
ggcctgggcgaccccatccccaagcggaccaaggagtcccgcaagcgccgcattctggag
ctgcagcagaagatcgcccgggagaagaaccaggagaaggtgggccaggtcatcgaggtg
ctcgtggagggcgcccatgaggagaccgacctcctggtcaagggccgccacgcgggccag
gccccggacatcgacggcaatgtgctgctggtggacggtgcgccccaggtcaacaccatc
cagaaggtgcgcatcgtgaaggcccacgcctacgacctcatcggcgaggtcgaggagggc
ggcctggaggccagcaccgccgcctacgaaaccgccttcaaggcgaggagctcaacccgc
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