Geothrix oryzae: GETHOR_04840
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Entry
GETHOR_04840 CDS
T09137
Symbol
rlmF
Name
(GenBank) ribosomal RNA large subunit methyltransferase F
KO
K06970
23S rRNA (adenine1618-N6)-methyltransferase [EC:
2.1.1.181
]
Organism
gex
Geothrix oryzae
Brite
KEGG Orthology (KO) [BR:
gex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gex03009
]
GETHOR_04840 (rlmF)
Enzymes [BR:
gex01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.181 23S rRNA (adenine1618-N6)-methyltransferase
GETHOR_04840 (rlmF)
Ribosome biogenesis [BR:
gex03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
GETHOR_04840 (rlmF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_10
MTS
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
BDU68383
LinkDB
All DBs
Position
complement(548781..549776)
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AA seq
331 aa
AA seq
DB search
MRSRAPKPAPKPAPGPPRPAKPGLHPRNRHAGGYDFPQLVKVSPDLAPFVVRAIHGGPSI
DFADPAAVKALNRALLLQAYGVRGWELPPGYLCPPVPGRADYLHHLADLLAASNGGAIPR
GPGVRVLDVGVGANAIYPLVGHGEYGWSFVGSDIDAAALASAARILAANPGLETVITLRR
QPDRGSIFAGVLDPGERFDLTLCNPPFHGSLREAREGTQRKWRNLGRGASAKPLLNFGGQ
GVELWCEGGEAGFARRMVAESQALGTQVLWFTTLLSSSASLPAVHRALRQAGAEEIRIVP
MAQGQKQSRFVAWTFLPREAREAWRSRWEGL
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgcgatcccgtgccccgaagcccgccccaaagcccgcaccaggcccgccccggcccgcc
aagccggggctgcatccccgcaatcggcacgccggggggtacgacttcccgcagctggtg
aaggtctctccggacctggcgcccttcgtggtccgcgcgatccatggcggcccctccatc
gactttgcggatccggcggccgtgaaggccctgaaccgggccctgctcctccaggcctac
ggcgtccgcggctgggagctgcctcccgggtacctgtgcccacccgtgccgggccgcgcg
gactacctgcaccacctggcggacctgctggcggcctccaacggaggcgcgatcccccgg
ggcccgggcgtgcgcgtcctggatgtgggcgtgggcgccaacgccatctatcccctggtg
ggtcacggcgagtacggctggtccttcgtgggctcggacatcgatgcagcggccctggcc
tcggccgcgcgcatcctggcggccaatcccggcctggagaccgtcatcacgctgcggcgg
cagccggaccgggggtcgatcttcgcgggcgtgctggaccccggggagcgcttcgacctg
acgctctgcaacccgcccttccacgggtcgctgcgcgaggcccgggagggcacccagcgg
aaatggcgcaacctcgggcgcggcgcctctgccaaacccctgctcaacttcggcggccaa
ggggtcgagctctggtgcgaggggggcgaggcgggcttcgcccggcgcatggtcgcggaa
agccaggccctcggcacccaggtgctctggttcaccaccctgctctccagctccgccagc
ctccccgccgtccaccgggccctgcggcaggcgggggcggaggagatccgtatcgtgccc
atggcccagggccagaagcagagccgcttcgtggcctggaccttcctgccccgggaggcc
cgggaagcctggcgaagccggtgggaagggttgtga
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integrated database retrieval system
