Geothrix oryzae: GETHOR_07740
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Entry
GETHOR_07740 CDS
T09137
Symbol
rluD
Name
(GenBank) pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
gex
Geothrix oryzae
Brite
KEGG Orthology (KO) [BR:
gex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gex03009
]
GETHOR_07740 (rluD)
Enzymes [BR:
gex01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
GETHOR_07740 (rluD)
Ribosome biogenesis [BR:
gex03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
GETHOR_07740 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
BDU68673
UniProt:
A0ABN6UV64
LinkDB
All DBs
Position
complement(875162..876178)
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AA seq
338 aa
AA seq
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MMQLIAEDGAPRLDRFLADRFPEIPRARWDAHVRLGEIKVNGQPVTKGGVRLRPGDRVET
ELPVIPVPAAHLEAEAIDLPSLFEDAHLWIVDKPAGMVVHPGPGHAGGTIVNALLHRLKT
PVVLDARDEEAEETEGEIGEETGELAEDVATGWPGLVHRLDRYTTGCLCLAKTAEAQRAI
QAQFKARTVEKRYLALVRHSPRLPQLGSLLIDEPIARHKQDRLRMVVAEGGRPAQTRIRV
LARTSSIALVECELLTGRTHQIRVHLAHLRAPLMGDPLYGGPGRWKDVDGEALLLPHPAL
HAWKLSVDHPETGVRIHAEAPIPEAFRALAASLGLPGY
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagctcatcgccgaggacggcgcgccacggctggaccgcttcctcgcggaccgc
ttccccgagattccccgcgcccgctgggatgcccatgtgcggctgggcgagatcaaggtg
aacgggcagccggtgaccaagggcggcgtgcgcctgcggccgggcgatcgggtcgagacc
gagcttccggtgatcccggtgccggccgcgcacctggaggccgaggccatcgacctgccc
tccctgttcgaggacgcccatctatggatcgtggacaagcccgcgggcatggtcgtgcat
ccgggccccggccatgccggaggcaccatcgtgaacgccctgctccatcgcctcaagacg
ccggtggtgcttgacgccagggacgaggaagcggaagagactgagggggagattggggag
gagaccggggaactggccgaagatgtggccacgggctggccgggcctcgtgcaccgcctc
gaccgctacaccacgggctgcctctgcctggccaagaccgccgaggcccagcgcgccatc
caggcccagttcaaggcccgcaccgtggagaagcgctacctggccctggtacgccattcc
ccgcgcctgccccagctgggcagcctgctgatcgacgagcccatcgcgcgccacaagcag
gaccgcctgcgcatggtcgtggccgagggcgggcgtcccgcccagacccgcatccgcgtg
ctggcgcgcacctcgagcatcgccctggtggagtgcgagctgctcacgggccgcacccac
cagatccgcgtccacctcgcccacctgcgggccccgctcatgggtgatcccctctacggc
ggcccgggccgctggaaggatgtggacggcgaagccctgctgctgccccatccggccctg
cacgcctggaagctctccgtggaccacccggaaaccggggtgcgcatccacgcggaagcc
cccattcccgaggccttccgggccctggccgcctctttgggcttgccagggtactga
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