Geothrix oryzae: GETHOR_08690
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Entry
GETHOR_08690 CDS
T09137
Name
(GenBank) hypothetical protein
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
gex
Geothrix oryzae
Brite
KEGG Orthology (KO) [BR:
gex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gex03009
]
GETHOR_08690
Enzymes [BR:
gex01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
GETHOR_08690
Ribosome biogenesis [BR:
gex03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
GETHOR_08690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
BDU68768
LinkDB
All DBs
Position
complement(983944..984957)
Genome browser
AA seq
337 aa
AA seq
DB search
MRKPAPKGPRTAPTTRKPTAARPAAGVTRTSAPARPTSGPARSSSAVRPSSSAGARPTAR
PTSGAPARRPAIDKTRPAAKQAPRKAAPSRPSGGASPRPARAGQERLQKILAAAGIASRR
ACEQIILDGRVQVNGKTVTELGACADSRRDEITVDLVEIQREAPVYILMNKPKGYVTTVR
DDQGRPTVMALLKGVPGRLYPVGRLDFNSEGLLLMTNDGALAQVLMGPEHEIPKVYLVKV
HRNPRPELLKEFQEGFLLSGRRLKPCHIEIAEKGDNPWLKVTLTEGKNQQIRRMFAAVGH
PVSKLRRVQFGPLADPLLKPGAWRYLNPQEIAAIKSL
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagcccgccccgaaggggccccgcaccgcgcccaccacccgcaagccaaccgcc
gcccgcccggccgccggcgtgacccggacctcggctcctgcccgtccgacctcaggtccg
gcccggtcctcgtctgccgtccgcccatcctcaagcgcgggcgcccgccccaccgcccgc
cccacctccggtgctcccgcccggcgccccgccatcgacaagacccggcccgcggccaag
caggccccgcgcaaggccgcgccgtcccgccccagcggtggcgcctcgcctcgtcctgcc
cgggccggccaggagcgcctgcagaagatcctggccgccgcgggcatcgccagccgccgg
gcctgcgaacagatcatcctcgacggccgcgtgcaggtgaacgggaagaccgtcaccgaa
ctgggcgcctgcgcggactcccgccgggacgagatcaccgtggacctggtcgagatccag
cgcgaggcgccggtctacatcctcatgaacaagccgaagggctatgtgaccaccgtgagg
gacgaccagggtcgccccaccgtgatggcgctcctcaagggcgtaccgggccggctctac
ccggtgggccgcctggacttcaactccgaggggctcctgctcatgaccaacgacggggcc
ctggcccaggtgctcatgggacccgaacacgagattcccaaggtctacctcgtcaaagtg
caccgcaatccccggcctgagctcctcaaggaattccaggagggcttcctgctcagcgga
cgccgcctcaagccctgccacatcgaaatcgcggagaagggcgacaacccctggctgaag
gtgaccctcaccgaagggaagaatcagcagatccgccgcatgttcgccgccgtgggccac
cccgtcagcaagctgcgccgggtgcagttcggccccctggccgatcccctgctgaagccc
ggcgcctggcgctacctgaacccccaggagatcgccgcgatcaagagcctttag
DBGET
integrated database retrieval system
