Geothrix oryzae: GETHOR_09480
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Entry
GETHOR_09480 CDS
T09137
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
gex
Geothrix oryzae
Pathway
gex02024
Quorum sensing
gex03060
Protein export
gex03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
gex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
GETHOR_09480 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
GETHOR_09480 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GETHOR_09480 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
gex02044
]
GETHOR_09480 (ffh)
Enzymes [BR:
gex01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
GETHOR_09480 (ffh)
Secretion system [BR:
gex02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
GETHOR_09480 (ffh)
Eukaryotic Sec-SRP protein
GETHOR_09480 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_33
Zeta_toxin
AAA_22
TctA
AAA_17
6PF2K
AAA_30
ATP_bind_1
AAA_31
APS_kinase
AAA_16
AAA_18
Motif
Other DBs
NCBI-ProteinID:
BDU68847
LinkDB
All DBs
Position
complement(1073040..1074398)
Genome browser
AA seq
452 aa
AA seq
DB search
MFDSLTQKLSQAMKALRGQSKLTEANLEAVLREVRMALLEADVHVSVARTFLQRVKEKAL
GAEVMQGLNPTQAFIDIVHRELVEIMGGQAPEHPIAFAAKPPTVVMMVGLQGAGKTTTCG
KLAVFLKKLGRSPLLVPADVYRPAAIEQLHVVAKDAGVPSFRTEEKDPVAICAAALAEAR
LKGWDTVILDTAGRLHLDETLMEELARIKTATSPDEIFFVADAMTGQDAVRSATAFHEKL
GITGVVLTKTDGDTRGGAAFSIKQATGQPLKFVGEGEKLEDFQRFHPDRMAQRILGMGDV
LSLIEHAKDKLDEKEAEVMAKRLAKNQFTLEDMRKQFQQVQKLGSMNKILGMLPGLGQMK
EQLASVATDKRIKHLEAIINSMTPAERANHNLLDGKRKRRIASGSGRPVSEINQLIKQFV
ETKKMMGQMNDPKFMARMQRMAKMGGGPNLPF
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacagcctcacccagaaactcagccaggccatgaaggccctccggggccagtcc
aagctgacggaagccaacctcgaagccgtgctgcgcgaagtgcgcatggccctcctggaa
gccgatgtccatgtgagcgtggcccgcaccttcctccagcgggtgaaggagaaggccctc
ggcgccgaggtcatgcagggcctcaaccccacccaggccttcatcgacatcgtccaccgg
gaactggtggagatcatgggcggccaggcgccggaacaccccatagccttcgccgccaag
ccgccgacggtggtgatgatggtgggcctgcagggtgcgggcaagaccaccacctgcggc
aagctggcggtcttcctcaagaagctgggccggtcccccctgctggtgcccgcggatgtc
taccgccctgcagccatcgagcagctgcatgtggtggccaaggatgccggcgtcccctcc
ttccgcaccgaggagaaggatcccgtggccatctgcgccgcggccctggccgaagcgagg
ctgaagggctgggacacggtcatcctcgacaccgcgggccgcctgcatctcgacgaaacc
ctgatggaggagctggcccgcatcaagacggccacctcgcccgacgagatcttcttcgtg
gccgatgccatgacgggccaggacgccgtccgcagcgccacagccttccacgagaagctg
ggcatcacgggcgtggtgctcaccaagaccgatggcgacacccgtggcggcgcggccttc
agcatcaagcaggccacgggccagcccctgaagttcgtgggtgagggcgagaagctggag
gacttccagcgcttccatcccgaccgcatggcccagcgcatcctgggcatgggcgatgtc
ctcagcctcatcgagcacgccaaggacaagctcgacgagaaggaagcggaggtcatggcc
aagcgcctggccaagaaccagttcacgctggaggacatgcgcaagcagttccagcaggtc
cagaagctgggctccatgaacaagatccttggcatgctgccgggcctggggcagatgaag
gagcagctggcgagcgtggccacggacaagcgcatcaagcacttggaggccatcatcaac
tccatgacgcccgccgagcgcgccaaccacaacctgctggacggcaagcgcaagcgccgc
atcgcctcgggcagcggccggcccgtgagcgagatcaaccagctcatcaagcagttcgtg
gagacgaagaagatgatgggccagatgaacgatcccaagttcatggcccgcatgcagcgc
atggccaagatgggcggcgggcccaacctgcccttctag
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