Geothrix oryzae: GETHOR_09750
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Entry
GETHOR_09750 CDS
T09137
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
gex
Geothrix oryzae
Pathway
gex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GETHOR_09750 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gex03019
]
GETHOR_09750 (groL)
03110 Chaperones and folding catalysts [BR:
gex03110
]
GETHOR_09750 (groL)
03029 Mitochondrial biogenesis [BR:
gex03029
]
GETHOR_09750 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gex04147
]
GETHOR_09750 (groL)
Enzymes [BR:
gex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
GETHOR_09750 (groL)
Messenger RNA biogenesis [BR:
gex03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
GETHOR_09750 (groL)
Chaperones and folding catalysts [BR:
gex03110
]
Heat shock proteins
HSP60 / Chaperonin
GETHOR_09750 (groL)
Mitochondrial biogenesis [BR:
gex03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
GETHOR_09750 (groL)
Exosome [BR:
gex04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
GETHOR_09750 (groL)
Exosomal proteins of other body fluids (saliva and urine)
GETHOR_09750 (groL)
Exosomal proteins of breast cancer cells
GETHOR_09750 (groL)
Exosomal proteins of colorectal cancer cells
GETHOR_09750 (groL)
Exosomal proteins of bladder cancer cells
GETHOR_09750 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BDU68874
UniProt:
A0ABM8DPJ7
LinkDB
All DBs
Position
1100753..1102378
Genome browser
AA seq
541 aa
AA seq
DB search
MAKSIIYAEDARQAILRGVNKLADAVQVTLGPKGRNVLIEKKFGSPLMTKDGVTVAKEIE
LKDKHENMGAQLVREVASKTSDIAGDGTTTATVLARAIYREGIKAVVSGANTMEIKKGID
LAVDTVVAAIDEIKKPVEGNAIAQVGTISANGDAEIGKIIAEAMAKVGKDGVITVEEAKG
RDTELTVVEGMQFDRGYLSPYFVTNPDQMKVELENPYILAYEKKVSNMRDLLPLLEQVVN
SRRPLLIIAEDVDGEALATLVVNKIRGTLNVAAVKAPGFGDRRKAMLEDIAILTGGKAIS
EDLGLKLENLTLADLGSAKKIVIDKENTTIVEGAGASEAIQGRVKQIRAQVEVSTSDYDK
EKLQERLAKLVGGVAVIKVGAASETEMKEKKARVEDAMHATKAAVEDGIVAGGGVALLRS
LTKLAALKLTGDQATGVDIVRKSLEEPLRQIANNAGVEGSVVVNAVREGKDNYGYNAATN
EYGDMVKFGVVDPAKVTKSALRNAASVASMMLTTEAIITEIPEPKAAAPAGPGMGGMEDM
Y
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggccaagtccatcatctatgccgaagatgcccgtcaggcgatcctgcgcggcgtgaac
aagctcgccgacgccgtgcaggtcaccctcggccccaaaggccgcaatgtcctcatcgag
aagaagttcggctccccgctaatgaccaaggacggtgtcaccgtcgccaaggagatcgag
ctcaaggacaagcacgagaacatgggcgcccagctggtgcgtgaggtcgcctccaagacc
tccgacatcgccggcgacggcaccaccaccgccaccgtgctggcccgcgccatctaccgc
gagggcatcaaggccgtcgtgagcggcgccaacaccatggagatcaagaagggcatcgac
ctcgccgtcgataccgtcgtggccgccatcgacgagatcaagaagcccgtcgagggcaac
gccatcgcccaggtcggcaccatctccgccaacggcgacgccgagatcggcaagatcatc
gccgaggccatggccaaggtcggcaaggacggcgtcatcacggtggaagaggccaagggt
cgcgacaccgagctgaccgtggtcgagggcatgcagttcgaccgtggctacctcagcccc
tacttcgtgaccaaccccgaccagatgaaggtcgagctggagaacccctacattctcgcc
tacgagaagaaggtctcgaacatgcgcgacctcctgcccctgctggagcaggtcgtcaac
agccgccgccccctgctgatcatcgccgaggatgtggacggcgaagcgctggccaccctc
gtggtgaacaagatccgcggcaccctgaatgtggccgccgtgaaggctcccggcttcggc
gaccgccgcaaggccatgctcgaggacatcgccatcctgaccggcggcaaggccatcagc
gaggatctgggcctcaagctcgagaacctcacgctggctgacctcggcagcgccaagaag
atcgtcatcgacaaggagaacaccaccatcgtcgagggcgccggcgccagcgaggccatc
cagggccgcgtgaagcagatccgcgcgcaggtcgaggtctccaccagcgactacgacaag
gagaagctgcaggagcgtctggccaagctcgtgggcggcgtcgccgtcatcaaggtgggc
gcggcttccgagaccgagatgaaggagaagaaggcccgcgtggaagacgccatgcacgcc
accaaggccgccgtcgaggacggcatcgtggccggcggcggcgtcgcgctgctccgcagc
ctgaccaagctcgccgcgctgaagctcaccggcgaccaggccacgggcgtggacatcgtc
cgcaagtccctggaggagcccctccgccagatcgccaacaacgccggcgtcgaaggctcc
gtggtcgtcaatgccgtccgcgagggcaaggacaactacggctacaacgccgccaccaac
gagtacggcgacatggtgaagttcggcgtggtcgatcccgccaaggtgaccaagtccgcc
ctgcgcaatgccgcctccgtggcctccatgatgctgaccactgaagccatcatcaccgag
atccccgagcccaaggccgctgcccccgcgggccccggcatgggcggcatggaagacatg
tattaa
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