KEGG   Geothrix oryzae: GETHOR_10620
Entry
GETHOR_10620      CDS       T09137                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
gex  Geothrix oryzae
Pathway
gex02020  Two-component system
Brite
KEGG Orthology (KO) [BR:gex00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    GETHOR_10620
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:gex02022]
    GETHOR_10620
Two-component system [BR:gex02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   GETHOR_10620
SSDB
Motif
Pfam: Response_reg Sigma54_activ_2 HTH_8 Sigma54_activat AAA_16 AAA_22 EccE
Other DBs
NCBI-ProteinID: BDU68961
LinkDB
Position
1204789..1206045
AA seq 418 aa
MDLLLVEDKDSFRRLLTQALEGSAWSVRAVADPQEALRALEAAPAHVLVTDLRLPGMSGL
ELIRRARQLQPGLRVVLMSAFGEPRDIVEAMRLGADDFLPKPFDLDAFLALLDRLRALVG
APPPDPAEPWIAHGAPMQALEGALGRAAATALPVLFRGERGAGKSRCARRLHALRHPAAP
FLSLAAETLGPEGPDPRTLQLLQGGSLYLADLAHLSPGALGPLTRAMDGPLGAGLCWMAG
VDAEVALPPDLAQRLGSLELKVPPLRERREDLLILARLFLTRAARREGRPEPWLERAAER
QLLDHAWPGNLRELEVLAGRTILFSEGPVIRAFPDLGLDGAPLRLPWPAPGTLEVMLKAV
ARSAEGELLRKALREAGGDLPPAAEGLGLTVRSLAQRLREHGIPLEDGDPDSVPRKAP
NT seq 1257 nt   +upstreamnt  +downstreamnt
atggatctgctgctcgtcgaggacaaggacagcttccgccgcctgctgacccaggccctc
gaggggtcggcctggtcggtgcgggcggtggcagatccgcaggaggccctgagggccctg
gaggcggcgccggcccatgtgctggtgacggatctgcgcctgccgggcatgagcgggctg
gagctgatccggcgggcccgccagctccagccgggcctgcgcgtggtcctcatgtccgcc
ttcggagagccccgcgacatcgtggaggccatgcggctcggcgccgacgacttcctgccc
aagcccttcgacctggacgcgttcctggccctgctggaccgcctgcgggccctggtgggc
gcgccgcccccggacccggcggaaccctggatcgcccacggcgcccccatgcaggccctg
gagggcgccctggggcgggcggccgccacggccctgcccgtgctcttccgcggggagcgc
ggcgccggcaagagccgctgcgcccgccggctccatgcgctgcgccatccggcagccccc
ttcctgagtctggccgccgagaccctgggtcccgaggggccggatccgcgcaccctgcag
ctgctccagggcggcagcctgtacctggcggacctggcccacctctcgccgggggccctg
gggcccctgacccgggccatggacggcccccttggggcgggattgtgctggatggccggt
gtggacgccgaagtcgcgctgcccccggacctggcccagcgccttgggtcgctggagctg
aaagtcccccccctgcgcgagcgccgggaggatctcctgatcctggcgcggctcttcctg
acgcgggccgcgcggcgcgaaggccggccggagccctggctggagcgggccgccgagcgc
caattgctggatcacgcctggcccggcaacctccgcgagctggaggtgctggcggggcgg
acgatcctcttctccgaagggcccgtcatccgcgccttcccggatctcgggctggacggg
gcccccctgcgcctgccctggccggcacccggaaccctcgaggtcatgctaaaggccgtg
gcgcgctcggcggagggcgagctgctgcggaaggccctgcgggaagcggggggagacctc
cccccggcggcggaaggtctggggctgacggtgcgaagcctcgcccagcgcttgcgggag
catggcatccctctggaagatggagatcccgactccgttccacggaaggccccatga

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