Geothrix oryzae: GETHOR_10980
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Entry
GETHOR_10980 CDS
T09137
Symbol
smc
Name
(GenBank) chromosome partition protein Smc
KO
K03529
chromosome segregation protein
Organism
gex
Geothrix oryzae
Brite
KEGG Orthology (KO) [BR:
gex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gex03036
]
GETHOR_10980 (smc)
Chromosome and associated proteins [BR:
gex03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
GETHOR_10980 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
DegS
AAA_29
DUF6317
Seryl_tRNA_N
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
BDU68997
LinkDB
All DBs
Position
1237798..1241307
Genome browser
AA seq
1169 aa
AA seq
DB search
MRLISLELHGFKSFADAQKLSFPGGMTAVVGPNGCGKSNISDSLAWVLGEQRASMLRGAE
MADVIFAGTAQRRATGLAEVKLVLEMPDPALPGSTREVTISRRLYRDTGSEYRINGREAR
LKDVQDLLLDTGMGTRAYSFIQQGQIDLILSSKPKDRRLLLEEAAGITRYKLRRADAEKR
LDETKANLQRLDDILYELNKQMDSLRRQAARARKAKELDEEIKVTQRILLAGKVVELEAA
KRRLLDQLDQTERRVAELTAQVSEKASEVEALRLSVDEQQQAQAKRTSAILGLDQRLQLA
DQERSFQEDRRSEAQGHRSRLGEHIQALAARLAESGDSFTALEAQLKEAADRLGQREADL
AKAEELLALAQGSLRHEEAELQALRERKAESQKEALARQKQRLGFQSQIAQLEGRLDGLN
HEESVRAPRLETLQTEAGQVERTLEGLLAQLEQAEEAALDQRRRADQLEEVQRALAQDHH
RAEAELDAAERRLRQLSDLLAKSFGDEAMQKGLTWLREQGARPRALVELLTVDEAVRPDL
ERLLGSWLQTLAVEASLVQRAAEAPGHLLLALDGAQAVPAPPEGCEPLSAHLHWTSSERP
LGRLLDRAFRCSDEALPALALAHPDLAFVSPGAIRLPFGPVQLGVSAPAASPLKLRVEQE
EAKATREALLDRLEDLEARRASGGDETRAARERSVEIDEDLRVLRRRVDSLKAQRTGLQA
QLSEINAASERADALWEQIEAEIKRLQGLLRDLEEHPEEVGDAALDEAIHQAESLVREAR
QRLDGRRDERLEVARSRDAAWAERDGHERHLQLAQRGRFDLEAERQRLEAESADQSSRAE
ACVKRLAELESESQELLRERETVQAQAQEAQPKLELDQEALRVQERGAREFQEALENARA
QHQEVLIHGAQVQGSQEALAKEVELALGLEIPAFLAGIREAEREAWDEGELVHQTRLNEL
HGRRMDLGGVNPLAIQELEEAETRLTFMNEQRADVTAAIGNLESTIQEINATSEDRFREA
FDFVNSRFQEVFREAFGGGNAHLSLEDPKNLLECGIEITAQPPGKTAKALTLLSGGEKAL
TAISLLFAIFHFKPSPFCVLDEVDAPLDEANVGRFAAMVQKMKADTQFIVITHQKPTMVA
ADTLYGVTMEEAGCSRLVSVQLREAEALV
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcctgatctccctcgaactccacggattcaagtccttcgctgatgcccagaagctc
agtttccccggtggcatgactgccgtcgtgggcccgaacggctgcggcaagtcgaacatc
tccgacagcctggcctgggtgctgggcgagcagcgggcctccatgctgcgcggggcggag
atggccgatgtcatcttcgcgggcaccgcccagcggcgggctacgggcctggccgaggtg
aagctggtcctggagatgcccgatccggccctgccgggttcgacccgggaggtgaccatc
tcccgccggctctaccgcgacaccggcagcgagtaccgcatcaacggccgggaggcccgg
ctgaaggatgtccaggacctgctgctggacacgggcatgggcacccgggcctacagcttc
atccagcaggggcagatcgatctcatcctcagcagcaagcccaaggaccggcgcctgctg
ctggaggaggccgccggcatcacgcggtacaagctgcgccgcgccgacgccgagaagcgc
ctggatgagaccaaggcgaacctgcagcgcctcgacgacatcctctacgaactgaacaag
cagatggactcgctgcgccgccaggcggcccgggcccggaaggccaaggagctggacgag
gagatcaaggtcacccagcgcatcctgctggccggcaaggtggtggaactggaggcggcc
aagcggcgcctcctcgaccagctggatcagaccgagcgccgggtggcggaactcacggcc
caggtctcggagaaggcctcggaagtggaggccctgcgcctctccgtggacgagcagcag
caggcccaggccaagcgcaccagcgccatcctcgggctggaccagcgcctgcagctggcg
gaccaggaacgcagcttccaggaggaccggcggagtgaggcccaggggcaccggagccgg
ctgggcgagcacatccaggccctggcggcgcggctggcggaatccggggattccttcacg
gcactcgaggcccagctgaaggaggccgcggatcgcctcggccagcgggaggccgacctg
gccaaggccgaggagctcctggccctggcccaggggtcgctgcgccacgaggaagcggaa
ctccaggccctgcgggagcgcaaggccgaatcccagaaggaggccctggcccgccagaag
cagcgcctcgggttccagagccagatcgcccagctcgaaggccggctggatggcctcaac
catgaagagtcggtgcgcgccccgcgcctggagacgctccagaccgaagccggccaggtg
gagcggacgctggagggtctgctcgcccagctggaacaggccgaagaggcggcgctggac
cagcgccgccgggcggaccagctggaggaagtccagcgcgccctggcccaggatcaccat
cgggccgaggccgaactggatgcggcggaacggcgcctgcgccagctctcggacctgttg
gccaagagcttcggcgatgaggccatgcagaagggcctcacctggctccgcgagcagggg
gcccggccgcgggccctggtggagctgctcacagtggacgaggccgtccggccggatctg
gagcgcctcctggggagctggctccagaccctcgcggtggaggcctccctggtgcagcgg
gccgccgaggccccgggccatctcctgctggccctcgacggggcgcaggcggttcctgcg
ccgcccgaaggctgcgagcccctgagcgcccatctccactggaccagctcggagcggccc
ctcggccggctgctggaccgcgccttccgctgctccgacgaggccctgccggccctggcc
ctggcccacccggacctggccttcgtgtcgccgggcgccatccgcctgcctttcggcccc
gtgcagctgggcgtgtccgcgcccgccgcctcgccgctcaagctgcgggtggagcaggag
gaggccaaggccacccgcgaggccctgctggaccgtctggaggacctggaggcccggcgt
gccagcggaggcgacgagacccgggcggctcgggagcggtccgtggagatcgacgaggat
ctgcgggtcctgcgccgccgcgtggactcgttgaaagcccagaggacggggctccaggcc
cagctctccgagatcaacgccgccagcgagcgggccgacgccctgtgggagcagatcgaa
gccgagatcaagcggctgcaggggctgctgcgcgacctggaggagcacccggaggaggta
ggcgacgcggccctggacgaggccatccatcaggccgagagcctcgtccgcgaggcccgg
cagcggctggatgggcgccgcgacgagcgcctggaagtggcccggagccgcgacgcggcc
tgggctgagcgcgacggccacgagcgccacctccagctggcccagcggggccggttcgat
ctggaggccgagcgccagcggttggaggcggaatccgccgaccagtcttcgcgggcggaa
gcctgcgtgaagcgcctggcggagctggaatccgaatcccaggagctgctgcgggagcgg
gaaaccgtgcaggcccaggcgcaggaggctcagccgaagctggaactggatcaggaggcc
ctgcgcgtgcaggagcggggcgcccgcgagttccaggaggctctggagaacgcccgggcc
cagcaccaggaagtgctgatccatggtgcccaggtgcagggcagccaggaggcgctggcc
aaggaggtggaactggccctggggctggagatccccgccttcctcgccgggatcagggag
gccgagcgcgaggcctgggacgagggcgagctggtgcaccagacccgtctgaacgagctg
cacggccggcgcatggacctgggcggcgtgaaccccctggccatccaggaactggaagag
gcggagacccgcctgaccttcatgaatgagcagcgggccgatgtcaccgccgccatcggg
aacctggaatccaccatccaggagatcaatgccaccagcgaggatcggttccgcgaggcc
ttcgacttcgtgaacagccgcttccaggaagtgttccgggaggccttcggcggcggcaac
gcccacctcagcctggaggacccgaagaacctgctggagtgcggcatcgagatcacggcc
cagccccccggcaagaccgccaaggcgctcacgctgctgagcggcggtgagaaggccctc
acggccatctcgctgctcttcgccatcttccacttcaaacccagccccttctgtgtcctg
gacgaagtggatgcgcccctggacgaggccaacgtgggccgcttcgccgccatggtgcag
aagatgaaggccgacactcagttcatcgtgatcacgcaccagaagcccaccatggtcgcg
gcagacaccctctatggcgtcaccatggaagaagccggctgctcccggctggtgagcgtg
cagctgcgggaggccgaggcgctggtgtga
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integrated database retrieval system
