Geothrix oryzae: GETHOR_14050
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Entry
GETHOR_14050 CDS
T09137
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
gex
Geothrix oryzae
Pathway
gex03030
DNA replication
gex03430
Mismatch repair
gex03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GETHOR_14050
03430 Mismatch repair
GETHOR_14050
03440 Homologous recombination
GETHOR_14050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gex03032
]
GETHOR_14050
03400 DNA repair and recombination proteins [BR:
gex03400
]
GETHOR_14050
Enzymes [BR:
gex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GETHOR_14050
DNA replication proteins [BR:
gex03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GETHOR_14050
DNA repair and recombination proteins [BR:
gex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GETHOR_14050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_30
RuvB_N
DNA_pol3_gamma3
AAA_16
AAA_22
AAA_5
TIP49
AAA_19
AAA_2
RCF1-5-like_lid
AAA_14
AAA_18
TsaE
DUF815
Zeta_toxin
TPR_28
SRP54
Motif
Other DBs
NCBI-ProteinID:
BDU69304
LinkDB
All DBs
Position
1591311..1592972
Genome browser
AA seq
553 aa
AA seq
DB search
MSTLALKYRPRLLSDLVGQEGSVKALANALKRAKESGRIHQAYLFAGVRGTGKTSTARIL
ARALNCAEGPTATPCGVCDPCRAAEQPDSSLDIVEIDAASRASVADARALREQVQTRPAF
CRYRIYIIDEVHMLSTEAFNALLKVIEEPPPHAIFVLATTELQDVPDTIKSRVQIFPFRL
IPVGLIEGRLRHVCEHEGVEVEAGSLRLVAEAGQGSMRDALTILDRVIAAGDGKVLEEAV
REQLGIVSAHLVQGVLSALVIGDTAALVEACRELNEQGADWATFWRELVLAFRDRLEAEA
RAARGPQDLLRWARMLNLLLSRERDLRDSSLPRVVVELALLTAAQLPHLAPLDALVSGAY
GAGAPPRPSSPPAGPPPVPSRAPQAAPAPEGPRRPAPAPTSTPAASFPARPAPASVPSPA
RAQAPVPAGAPAPPQLRVACSEALRQVPGLRALGTAPQMATDLRWEPPVLHFRFPGNVRQ
TLQDLEREKTNPHVLAALAAVLPGLRELEISFEGGSAGETQGDRPEDRLRREPAFQELLR
LSGGEVLEIRRES
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccctcgccctcaaataccgcccccgcctgctatccgaccttgtgggacaggaa
ggtagtgtgaaggcgctggccaacgccctgaagcgggccaaggagagcggccgcatccat
caggcctacctcttcgcgggggtgcgcggcacgggcaagaccagcacggcgcgcatcctg
gcccgggccctgaactgcgccgaaggccccaccgccacgccctgcggggtctgcgatccc
tgccgcgccgccgagcagcccgacagcagcctggacatcgtcgagatcgacgccgccagc
cgggcctccgtggccgacgcccgggccctccgggagcaggtgcagacgcggccggccttc
tgtcgctaccggatctacatcatcgacgaagtgcacatgctcagcaccgaggccttcaat
gccctgctgaaggtcatcgaggagccgccgccccacgccatcttcgtgctggcgaccacg
gaactgcaggatgtgcccgacaccatcaagagccgcgtccagatcttcccgttccgcctg
attcccgtgggtctcatcgaaggccgcctccggcatgtctgcgagcacgagggtgtggag
gtggaggccggcagcctgcggctggtggccgaggcgggccagggctccatgcgcgatgcg
ctgaccatcctcgatcgcgtcattgccgccggcgatgggaaggtgctggaggaggccgtc
cgggagcagctgggcatcgtcagcgcccacctggtgcagggcgtcctgtcggccctggtc
atcggcgacacggcggccctggtggaggcctgccgcgagctgaacgaacagggcgccgac
tgggccaccttctggcgcgagctggtgctggccttccgcgaccgcctggaagcagaagcc
cgagccgcccggggcccccaggacctgctgcgctgggcgcggatgctgaacctgctgctg
agccgggagcgcgacctgcgggacagcagcctgccccgcgtggtggtggagctggccctt
ctcacggcggcgcagctgccgcacttggcccccctggatgccctcgtctccggggcctac
ggggccggagcgccgccgcggccttcgagcccgcccgccgggccgccgccggtcccttcc
cgggccccccaggccgcgccggcgcctgaggggcctcgcaggcccgcaccggcccccaca
tcaactcccgcggccagcttcccggcccgcccagccccagcttccgtcccttctcctgcc
cgcgcccaggcgccagttcccgcgggcgcaccggcccccccccagctgcgggtggcctgc
agcgaggcgctccgtcaggtgcccggcctccgggctctcggcacggcgccccagatggcc
accgatctccgctgggagccgccggtgctgcacttccggttcccgggcaatgtgcggcag
accctccaggacctcgagcgggaaaagaccaatccccatgtcctggcggcgctggcggcc
gtgctcccgggcttgagggagctggagatcagcttcgagggcgggtccgccggagaaacc
caaggcgaccggcccgaggaccgtctgcggcgggaacccgccttccaggagctgctgcgc
ctcagcgggggcgaggtgctggaaatccggcgggagagctaa
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