Geothrix oryzae: GETHOR_14350
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Entry
GETHOR_14350 CDS
T09137
Symbol
truA_1
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
gex
Geothrix oryzae
Brite
KEGG Orthology (KO) [BR:
gex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gex03016
]
GETHOR_14350 (truA_1)
Enzymes [BR:
gex01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
GETHOR_14350 (truA_1)
Transfer RNA biogenesis [BR:
gex03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GETHOR_14350 (truA_1)
Prokaryotic type
GETHOR_14350 (truA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
BDU69334
LinkDB
All DBs
Position
complement(1625264..1626094)
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AA seq
276 aa
AA seq
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MAVKPAPLAAFRLLLEYDGSRFQGWQKQGPKQSREGVRTVAGSLEHAIHEAGLRLLYLGG
AGRTDAGVHALGQVAHLHLEAKGAPRPGELRRLLDAALPQDVAVRDVRSCPPRFHARHDA
VDRSYLYQISHRRSAFGKPWIWWVKRSLDPQKLSQAWSAFQGDLDVSAFADLDPEEDGRS
RIIRCEVVDSGSLTLLRVRATHFFRRQVRRMVGASVACALGEEEPRRVLEDLRNPTEAAN
LYWGAKAAPASGLFLEAVRYPGDPEPGPPKPTLSIP
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgaaacccgctcccctcgccgctttccggctcctgctggagtacgacggcagc
cgcttccagggctggcagaaacagggaccgaagcagtcccgcgagggcgtgcgcaccgtg
gccgggagcctggagcacgccatccacgaagccggcctgcggctcctctacttgggcggc
gcgggacggacggatgcgggcgttcatgccttgggccaggtcgcccacctccacctggaa
gccaagggcgccccgcgccccggcgagttgcggcgcctcctggatgcggccctgccccag
gatgtcgccgtgcgggatgtgcggtcctgtcctccgcgcttccacgcgcggcacgacgcc
gtggaccgcagctacctgtaccagatcagccaccgccgcagcgccttcggcaagccgtgg
atctggtgggtgaagcgcagcctggatccccagaaattgagtcaggcctggagcgccttt
cagggcgacctggatgtgagcgccttcgcggatctggatcccgaggaggacggccgcagc
cggatcatccgctgcgaggtcgtcgatagcggctccctcaccctgctgcgggtgcgggcc
acccatttcttccgccgccaggtgcgccgcatggtgggcgcctccgtggcctgcgccctg
ggcgaggaagaaccccgccgcgtgctggaggacctccgcaaccccacggaagccgccaac
ctctactggggcgccaaggccgcccccgcctcgggcctgttcctggaggccgtgcgctac
cccggagatcccgaacccggaccgccgaagcccaccctctccattccctga
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