Geothrix oryzae: GETHOR_15160
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Entry
GETHOR_15160 CDS
T09137
Name
(GenBank) hypothetical protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
gex
Geothrix oryzae
Brite
KEGG Orthology (KO) [BR:
gex00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gex01011
]
GETHOR_15160
Enzymes [BR:
gex01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
GETHOR_15160
Peptidoglycan biosynthesis and degradation proteins [BR:
gex01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
GETHOR_15160
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
Motif
Other DBs
NCBI-ProteinID:
BDU69415
LinkDB
All DBs
Position
complement(1717822..1719843)
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AA seq
673 aa
AA seq
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MALPLLTALLWGTMPVQLPASSPQAHVAVAPPRAPESDSTRIARLRSLVEAAEQALEAED
ETAAADRADEADVLTADWPAELLRNADVQSLLQRLKEVQDQLAEEEAPEAEPGLKTTGEV
VSISGEELRAELERVRAAEQGATYDFPIDLNDKVLTWVSLFTTTKRGFMENALGRASMYM
PMIRQVFAEEGVPQDLAYLAVIESGFRNEAKSHAKAVGMWQFIRSTGRIYGLTGNAWIEE
RRDPVKATRAAARYLKRLYEISGDWYLASSGYNAGPLTLERAIQNIGTRNFWDLARSRWL
RTETKNYVPELCAAILVGRNPERYGLRILPLPPYAYETVAVPSMTSLTVLARCAGTDSNT
LKALNPELLRGSTPPGAYMLRVPPGKAGECLRQLARMPAGKRLDFQHYTVRKGDTLAKVA
RRFRLTPDDLLDANDLTAKQFKPGKRLLVPPPPTLALDDRDLAPKVERVKLLGDRPLEPL
PALTPVPTASETATSPGAEPPLAAEKPAPPEPAAAPGLAPAAAAPPRESPVRPVEVPSHP
PGGEPEAASGTLYRARPGDTLAKISRARGVPLGALMRLNPQAVKTLRPGDPVRLPGSATP
AASASARASAPSPASGAASGSASTTPRVHVVQKGETLAAIGRKYGLDPKDLKVWNRMKRD
RIQAGQRLRLSPR
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgccgcttctgaccgccctcctctgggggacgatgccggtgcagctgccggcg
tcgtccccccaggcgcatgtggcggtcgctcctccccgggcgcctgaatccgactcgacc
cgcatcgcgcgcctccggagcctcgtggaagcggcggagcaggccctggaggccgaagac
gaaacggcggcggccgatcgtgccgacgaggcggatgtcctcacggcggactggcctgcg
gaactgctgcggaacgccgatgtgcagagccttttgcagcggctgaaggaggtccaggac
cagctcgccgaggaggaggcccccgaggccgagcccggcctcaagaccactggcgaggtg
gtgtccatcagcggcgaggaactgcgggcggaactggagcgggtccgggccgcagagcag
ggcgccacctacgatttccccatcgatctgaacgacaaggtgctcacctgggtgagcctc
ttcaccaccaccaagcgcggcttcatggagaacgccctgggtcgcgcctcgatgtacatg
ccgatgatccggcaggtcttcgcggaggaaggggtgccgcaggatctggcctacctggct
gtgatcgaatcgggcttccgcaacgaggccaagagccacgccaaggccgtgggcatgtgg
cagttcatccgttccacgggccgcatctacggcctcacgggcaacgcctggatcgaggag
cggcgcgacccggtgaaggccacccgcgcggcggcccgctacctcaagcggctgtacgag
atctccggcgactggtatctggcttcctccggctacaacgccggtcccctgaccctggag
cgcgccatccagaacatcgggacccggaatttctgggatctggcccgctcccgttggctg
cgcaccgagaccaagaactatgtgcccgaactgtgcgccgcgatcctggtcgggcgcaac
cccgagcgctacggcctgcgcatcctgccgctgcctccgtacgcctacgagacggtggcc
gtgcccagcatgaccagcctcacggtgctcgcccgctgcgccggtacggattcgaacacc
ttgaaggccctgaatccggagctgctgcggggttccacaccgccgggcgcctatatgctg
cgcgtgcccccgggcaaggccggtgagtgcctgcgccagctcgcccgcatgcccgccggc
aagcggctggacttccagcactacaccgtccggaagggcgacacgctggccaaggtggcc
cggcgcttccggctgacgccggatgacctgctggatgccaacgacttgacggcgaagcag
ttcaagccgggcaagcgcctgctggtgccgcctccccccaccctcgcgctggatgatcgg
gacctggcccccaaggtcgaacgcgtgaagctgctcggagaccggcccctggagccgctc
cccgcgctgacgcccgttccgacggcttcggagacggccacctctccgggcgccgaacct
ccgctcgcagcggagaagcccgcgccgcctgagccggcggccgcacccgggctggcgcct
gccgcggcggcaccgccccgtgaaagccctgtccgcccggtggaagtcccctcccatccg
cccggcggcgagccggaggccgcttctggcaccctgtaccgcgcccggcccggcgacacc
ctggccaagatttcccgggcccgcggcgttcccctgggagcgctcatgcggctgaacccc
caggcggtgaagacccttcgccccggcgatcccgtgcggctgccgggctcagcgacaccg
gcggcctcggcctcagcgcgggcttcggccccgtccccggcctcgggggcggcctcgggt
tcggcctcgaccaccccacgcgtccatgtggtccagaagggcgagactctggccgccatc
ggccggaagtacggcctggatcccaaggatctcaaggtctggaaccggatgaagagggac
cggatccaggcgggccagcggctccggttgtccccccgctga
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