Geothrix oryzae: GETHOR_17200
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Entry
GETHOR_17200 CDS
T09137
Symbol
trpS
Name
(GenBank) tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
gex
Geothrix oryzae
Pathway
gex00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gex00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
GETHOR_17200 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gex01007
]
GETHOR_17200 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gex03016
]
GETHOR_17200 (trpS)
Enzymes [BR:
gex01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
GETHOR_17200 (trpS)
Amino acid related enzymes [BR:
gex01007
]
Aminoacyl-tRNA synthetase
Class I (G)
GETHOR_17200 (trpS)
Transfer RNA biogenesis [BR:
gex03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
GETHOR_17200 (trpS)
Prokaryotic type
GETHOR_17200 (trpS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
BDU69619
UniProt:
A0ABN6V0I3
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All DBs
Position
complement(1928558..1929547)
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AA seq
329 aa
AA seq
DB search
MHRILSGIQPSGSQHIGHLVGALDNFTHLQGKGEAFYMIADWHALTSKYESVGEIWPATL
ELTATYLAAGLDPKQATIFVQSLVKEHAELHLLLSMVTPLSWLERVPTYKEKMQNAVADL
GSYGFLGYPLLMTADIIIYKAHKVPVGEDQLFHVELAREVLRRFNFLYQREVFPEPEAVL
TKTPKVPGLDGRKMSKSYGNCIYLRDSNADILEKCTRQMASDPARVRKTDPGNPDVCPVF
EFHKLFSEDATVQLVNTECRRAGIGCFDCKKRVAEAIIRRVEPVREKIEGYLARPDDLQE
VLRDGSARARAVAVETMADVRGAMKMPNI
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgcatcctgtccggcatccagccttccggttcccagcacatcggccacctggtg
ggcgccctcgacaacttcacccacctccaggggaagggcgaggccttctacatgatcgcg
gactggcacgcgctcacctcgaagtacgaatccgtcggggagatctggccggccacgctg
gagctcaccgccacctacctcgcggcgggcctggatccgaagcaggccacgatcttcgtg
cagagcctggtgaaggagcacgccgagctgcacctgctgctgtccatggtcacgccgctt
tcatggctggagcgggtgcccacctacaaggagaagatgcagaacgccgtggccgatctg
ggcagctacgggttcctcggctatccgctgctgatgaccgcggacatcatcatctacaag
gcccacaaggtgcccgtgggcgaagaccagctcttccatgtggagctcgcccgggaggtg
ctccgccgcttcaacttcctctaccagcgggaggtgttccccgagcccgaggccgtgctc
accaagacgcccaaggtgccgggcctggacggccggaagatgtcgaagagctacgggaac
tgcatctacctgcgggacagcaacgccgacatcctggagaagtgcacgcggcagatggcc
tccgacccggcccgcgtgcgcaagaccgatcccggcaaccccgatgtctgtcctgtcttc
gagttccacaagctcttcagcgaggatgcgacggtccagctggtgaacacggagtgccgc
cgggcgggcatcggctgcttcgactgcaagaagcgcgtggccgaggccatcatccgccgc
gtcgagcccgtgcgcgagaagatcgaaggctacctggcccggccggacgacctgcaggaa
gtgttgcgcgacggcagcgcccgggcccgggccgtggcggtggaaaccatggcggatgtg
cgcggcgccatgaagatgccaaacatctga
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