Geothrix oryzae: GETHOR_17400
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Entry
GETHOR_17400 CDS
T09137
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
gex
Geothrix oryzae
Brite
KEGG Orthology (KO) [BR:
gex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gex03400
]
GETHOR_17400
Enzymes [BR:
gex01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
GETHOR_17400
DNA repair and recombination proteins [BR:
gex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
GETHOR_17400
Prokaryotic type
GETHOR_17400
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BDU69639
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All DBs
Position
complement(1947390..1948799)
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AA seq
469 aa
AA seq
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MRSIVWFRGKDLRVADHGPLAEAVATGEVIPLFVLDPFFFAPERARELPHRMQFLLESLK
ALEADLARLGSRLLVVPGRSVEVVPRLAARWRADRVLAHRWVEPFGRERDRRVGEALARQ
GTGFCLFEGETLLPPGSVRNGQGGPFRVFTPFAKAIMARIDLPLIQDLRSKLPPLPKGVT
ADEVPIPALADLGIDANPGLLRGGEEAARERLRAFLAGPLANYGTDRDRMDRPGTSRLSA
DLKFGTLSVRAVWQVVAASGQGESARRFLNELLWREFSHHLLWEWPELLEQPFRTGFQAF
PWREDEAAWEAWTAGRTGYPVVDAAARQLKAEGFVHNRARMVAASFLAKHLLLDYRRGEA
HYMAWLADGDWAANNAGWQWSAGCGCDAQPWFRIFNPTAQGLKFDPDGAYVKRWVPELAG
LPAALVHEPWKAPAALRGRLDYPGPIVDHAWARQRFLAVAKGHLGREAP
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgcggagcatcgtgtggttccggggcaaggacctgcgggtggcggatcacggcccgctg
gcggaggccgtggccacgggcgaagtgattccgctgttcgtgctggaccctttcttcttc
gcgccggagcgggcccgggagctgccccaccggatgcagtttctgctggaatcgctgaag
gcgctggaggccgacctcgctcggctgggttcgcgcctgctggtggtgcccgggcgcagc
gtggaggtggtgccgcggctggcggcccggtggcgggcggatcgggttctggcccaccgc
tgggtggagcccttcggccgggagcgggatcgccgggtgggcgaggccctggcgcgccag
ggcaccgggttctgcctgttcgagggggagaccctgctgccgccggggtccgtacggaat
gggcagggaggcccgttccgggtgttcacgcccttcgctaaggccatcatggccaggatt
gatcttccgttgatccaggatttgcggtcaaaacttcccccgcttcccaagggtgtcacc
gccgatgaggttcccatcccggccctggccgacctggggatcgacgcgaacccggggctt
ctgcgggggggcgaggaggcggctcgggagcgcttgcgggccttcctggccgggcctctg
gcgaactacggcacggaccgggaccgcatggaccggcccgggacctcgcggctcagcgct
gatctgaagttcggcaccctctcggtgcgggccgtctggcaggtggtggcggcgagcggc
cagggtgaatccgcgcggcgcttcctcaatgagctgctttggcgcgagttcagccaccac
ctgctgtgggaatggccggagctgctggaacaacccttccgcacggggttccaggctttt
ccctggcgggaggacgaggcggcctgggaggcctggacggcgggccgtacggggtatccg
gtggtcgatgccgccgcccggcagctgaaggccgaggggttcgtccacaaccgggcccgc
atggtggccgccagcttcctggccaagcacctgctgctggactaccggcgcggcgaggcg
cactacatggcctggctcgccgatggcgattgggccgccaacaatgcgggctggcagtgg
agcgcgggctgtggctgcgatgcccagccctggttccgcatcttcaatcccaccgcccag
ggattgaagttcgatccggatggcgcctatgtgaaacgctgggtgcctgagctggccggg
ctcccggccgccctcgtccatgaaccctggaaggcgcccgcggcgctccgcggaaggctg
gactaccccgggccgatcgtggatcacgcctgggcccggcagcggttcctcgcggtggcg
aaaggccacctggggcgcgaggcgccctga
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