Geothrix oryzae: GETHOR_19940
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Entry
GETHOR_19940 CDS
T09137
Symbol
fadN
Name
(GenBank) putative 3-hydroxyacyl-CoA dehydrogenase
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
gex
Geothrix oryzae
Pathway
gex00071
Fatty acid degradation
gex00362
Benzoate degradation
gex00650
Butanoate metabolism
gex01100
Metabolic pathways
gex01120
Microbial metabolism in diverse environments
gex01200
Carbon metabolism
gex01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
gex00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
GETHOR_19940 (fadN)
09103 Lipid metabolism
00071 Fatty acid degradation
GETHOR_19940 (fadN)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
GETHOR_19940 (fadN)
Enzymes [BR:
gex01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
GETHOR_19940 (fadN)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
ECH_2
NAD_binding_2
F420_oxidored
ApbA
2-Hacid_dh_C
NAD_Gly3P_dh_N
Motif
Other DBs
NCBI-ProteinID:
BDU69893
LinkDB
All DBs
Position
complement(2224201..2226564)
Genome browser
AA seq
787 aa
AA seq
DB search
MNIKKIGVLGSGVMGSGIAAHVASAGCQVELLDIVIDEAAPDKLAEGALAALAKSKPALA
MHASFLKKIRPGNLRDHLDRLADCDWVVEVVKEDLAIKRELYGRLEPQLKAGAWVTSNTS
GIPLKLLVEGRTDAFRKHFVITHFFNPVRYLRLLEFVKGPEVDEAEALAFRTWLEEALGK
EVVPAFDSPTFIGNRIGIHGIMATLHMALAEKIPFEVLDSVLGDAAARAKSAAFRTADLA
GVDILAATAKNVYDLCPNDEVRDTFKFPEFLQYMLDNKLLGNKTKQGFFKKGPKDAKGKK
TFLALDPATREYIPQVKRDWPILKELKGLDDPAEKVKTLLTSDTEAGRLAWRCIAPNLTY
AVNRLGEVTDGPLNVDRAIKNGFAFELGPFETWDTLGVERVAARMRFEEQPIAPLVEQML
AKGITSFYRWEHGVPVAQLNPKTLAYDPILEDRRVIILKREEGRGKVIAENGSCQLYDLG
DDVACLSFRSKMNALDDGIIGLMEDTVQKHVPGRFKGLVLGNQGQHFSAGANLVMVLNAA
KDKQFDLIEEVARRLQYAGRMLTYAPFPTVSAPFNLALGGGCEMTMACQRTVGHAELYIG
LVEVGVGVIPAGGGCLQMLLRMEEAMAAKGELGPMPKVKAAFQAIGTANVNTSFDEAQRN
GYLRRTDRRVMNKAFLLHEAKQEVLKMAADFQPVKERTLRLPGRGGSEALKMAVRDFQLQ
GLASEHDAVIMGELANILCGGDVSLVQEITEERILELERQAFTRLCGYEKTQARMDAILK
TGKPLRN
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcaagaagatcggagtcctcggatcgggcgtgatgggctcgggcatcgcggcg
catgtggcgtcggcgggctgccaggtggagttgctggacatcgtcatcgacgaggcggcg
ccggacaagttggcggagggcgccctggcggcgctggcgaagtccaagccggcgctggcc
atgcacgcctccttcctgaagaagatccggcccggcaacctgcgcgaccacctcgaccgt
ctggcggactgcgactgggtggtggaagtggtgaaggaggatctggccatcaagcgcgag
ctgtacggccgcctggagccccagctgaaggcgggcgcctgggtcacctcgaacacctcg
ggcattccgctgaagctgctggtggaggggcggaccgacgccttccggaagcacttcgtc
atcacccacttcttcaaccccgtgcgctacctgcggctgctggagttcgtgaagggcccc
gaagtggacgaggcggaggccctggccttccgcacctggctggaggaggccctcggcaaa
gaggtggtaccggcctttgacagccccaccttcatcggcaaccgcatcggcatccacggc
atcatggccaccctgcacatggcgctggccgagaagatccccttcgaggtgctggattcg
gtgctgggcgatgcggcggcccgggccaagagcgcggccttccggaccgcggatctcgcg
ggcgtggacatcctcgcggccacggccaagaatgtctacgacctctgcccgaacgacgag
gtgcgcgacaccttcaaattcccggagttcctccagtacatgctggacaacaagctcctg
ggcaacaagacgaagcagggcttcttcaagaagggccccaaggacgccaagggcaagaag
accttcctggccctggatcccgccacccgcgagtacatcccgcaggtgaagcgggactgg
cccatcctgaaggagctgaagggtctcgatgatccggcggagaaggtgaagacgctgctc
accagcgacaccgaagccggccgcctggcctggcgctgcatcgcgccgaaccttacctac
gccgtgaaccggctgggcgaggtgacggatggccccctcaatgtggatcgcgccatcaag
aacggcttcgccttcgagctggggcccttcgagacctgggacaccctgggcgtcgagcgg
gtcgcggcccgcatgcggttcgaggagcagcccatcgcgccgctcgtcgagcagatgctg
gccaagggcatcaccagcttctaccgctgggagcacggcgtccccgtggcccagctcaat
ccgaagaccctggcctacgatcccatcctcgaagaccggcgcgtgatcatcctcaagcgc
gaggagggccggggcaaggtgatcgcggagaacggcagctgccagctctacgatctgggc
gacgatgtggcctgcctcagcttccgcagcaagatgaacgccctggatgacggcatcatc
ggcctgatggaggacaccgtccagaagcatgtgcccggtcgcttcaagggactggtgctg
ggcaaccagggccagcacttcagcgccggcgccaacctggtgatggtgctgaacgcggcc
aaggacaagcagttcgacctgatcgaggaagtggcccggcgcctgcagtacgccggccgc
atgctcacctacgccccgttccccacggtgtcggcgcccttcaacctggccctcggcggc
ggctgcgagatgaccatggcctgccagcggacggtgggccacgccgagctctacatcggt
ctggtggaagtgggcgtgggcgtcatcccggcgggcggcggctgcctccagatgctgctc
cgcatggaagaggccatggccgccaagggcgagctgggccccatgcccaaggtgaaggcg
gccttccaggccatcggcacggcgaatgtgaacaccagcttcgacgaggcccagcgcaac
ggctacctgcgccgcacggaccgccgcgtgatgaacaaggccttcctgctgcacgaagcc
aagcaggaggtcctgaagatggccgcggacttccagccggtgaaggagcgcaccctgcgc
ctgccgggtcgggggggcagcgaagccctcaagatggccgtgcgcgacttccagctgcag
ggcctcgccagcgagcacgacgccgtcatcatgggcgagctggccaacatcctgtgcggc
ggggatgtgagcctcgtgcaggagatcaccgaggagcgcatcctcgaactcgaacggcag
gccttcacccgtctgtgcggctacgagaagacccaggcccgcatggacgccatcctgaag
accggcaagccgctgagaaactag
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