Geothrix oryzae: GETHOR_21230
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Entry
GETHOR_21230 CDS
T09137
Symbol
waaF
Name
(GenBank) ADP-heptose--LPS heptosyltransferase II
KO
K02843
lipopolysaccharide heptosyltransferase II [EC:
2.4.99.24
]
Organism
gex
Geothrix oryzae
Pathway
gex00540
Lipopolysaccharide biosynthesis
gex01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gex00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
GETHOR_21230 (waaF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
gex01005
]
GETHOR_21230 (waaF)
Enzymes [BR:
gex01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.24 lipopolysaccharide heptosyltransferase II
GETHOR_21230 (waaF)
Lipopolysaccharide biosynthesis proteins [BR:
gex01005
]
Core region
GETHOR_21230 (waaF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
Motif
Other DBs
NCBI-ProteinID:
BDU70022
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All DBs
Position
2382940..2383905
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AA seq
321 aa
AA seq
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MAVIPDRATWVRFPRFVGDAAMQLPVLRLLRELDLGPIVVWGPKTTVGLVADTWFCDAAL
PDEGKPGPFEMARILRNHRAARSIHFPKSLRPALAAWLARVPERIGVDESLAGLFNTHSG
PFWDAEGPFLLRYHAVLKRRWPDLPPMPYADFDPAVAIDKPAERYLCLMPGSTWPSKAWP
VDHYRTLLLKARSEGYAVAVLGSPDEAATCAAVAGREGLDLCGKTTLKEAAAWMRGATAV
LGNDSGLSHLAAACGAPVLALYGATDPGGSTPWGPKSRGLRKEGVPCAPCFKPACFTPGH
PCLAGIGPDQVWAELQGLITG
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgattcccgaccgcgccacctgggtacgcttcccgcggttcgtgggcgatgcc
gccatgcagctgcctgtgctgcgcctgctgcgggagctggatctcggccccatcgtcgtc
tggggcccgaagaccaccgtgggcctggtggcggacacctggttctgcgacgcggccctg
cccgacgaaggcaagcccggtcccttcgagatggcgcgcatcctccggaaccaccgcgcg
gcccgcagcatccacttcccgaagtccctgcggccggccctggccgcctggctggcccgg
gtgcccgagcgcatcggcgtggacgagagcctggcgggcctcttcaacacccacagcggc
cccttctgggacgcggagggccccttcctgctccgctaccacgccgtgctgaagcggcgc
tggccggacctgccccccatgccctatgccgacttcgatccggccgtggccatcgacaag
cctgcggagcgctacctctgcctcatgcccggctcgacctggccctccaaggcctggccc
gtggaccactaccggaccctcctcctgaaggcccgctccgaaggctatgccgtggccgtg
ctgggctcgccggacgaggcggccacctgcgcggcagtggcgggacgcgaaggcctcgac
ctctgtggaaagaccaccctgaaagaggccgcggcctggatgcgcggagcgacggccgtg
ctgggcaacgactcgggcctgagccacctggccgccgcctgcggggcgcccgtgctggcc
ctctacggcgccacggaccccggcggctccaccccctggggaccgaagagccggggcctc
cggaaggagggcgtcccctgcgcgccctgcttcaagccggcctgcttcacgccgggccac
ccttgtctggcgggcatcgggccggaccaggtctgggcggaactccagggcctgataacc
ggatag
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