Geothrix oryzae: GETHOR_21260
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Entry
GETHOR_21260 CDS
T09137
Symbol
hldD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
gex
Geothrix oryzae
Pathway
gex00541
Biosynthesis of various nucleotide sugars
gex01100
Metabolic pathways
gex01250
Biosynthesis of nucleotide sugars
Module
gex_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
gex00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
GETHOR_21260 (hldD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
gex01005
]
GETHOR_21260 (hldD)
Enzymes [BR:
gex01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
GETHOR_21260 (hldD)
Lipopolysaccharide biosynthesis proteins [BR:
gex01005
]
Core region
GETHOR_21260 (hldD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
NAD_binding_10
TrkA_N
KR
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
BDU70025
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All DBs
Position
2385980..2386915
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AA seq
311 aa
AA seq
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MFIVTGGAGFVGSNLVRELNRRGHTDILVVDNLARAEKARNLADLTLSDYMDKREFRARL
DAGTLDLRPEAVFHNGACSDTMESDGRYMMENNFGDSKALLHWCLARKAPLVYASSAATY
GASTDFEPVPKNEGPLNVYGYSKLAFDQHVRSLLPAIQSPVVGLRYFNVFGPREHHKGRM
MSVLHQLLRQLKESGACRLFKGTDGFGDGEQQRDFIFVGDIVAINLHFGGAGMVKGIVNA
GTGRARSFNDIARTLIAHLGQGRIDYIPFPEELRGKYQSFTQADVRSLRGAGFAAPFTEL
EAGIAATLAEI
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgttcatcgtcacgggcggcgcggggttcgtgggcagcaacctggtgcgggagctgaac
cgccgcgggcacacggacatcctcgtggtggacaacctcgcccgggcggagaaggcccgg
aacttggcggacctcacgctttcggactacatggacaagcgcgagttccgggcgaggctg
gacgcgggcacgctggacctgcggcccgaggccgtgttccacaacggcgcctgctccgac
acgatggaatccgacggccgctacatgatggagaacaacttcggcgattcgaaggcgctg
ctccactggtgcctggcccgcaaggcgcccctggtctacgccagcagcgcggccacctac
ggcgccagcacggacttcgagcccgtgccgaagaacgaaggccccttgaatgtctatggc
tactccaagctggccttcgaccagcatgtgcggagcctcctgccggccatccagagtccc
gtggtgggcctgcgctacttcaatgtcttcggcccccgggagcaccacaagggccgcatg
atgtccgtgctgcaccagctgctgcgccagctgaaggaatcgggcgcctgcaggctcttc
aagggcaccgacggcttcggcgatggcgagcagcagcgtgacttcatcttcgtgggcgac
atcgtggccatcaatctccacttcggcggcgcaggcatggtgaagggcatcgtgaacgcc
ggcacgggacgcgcccgcagcttcaacgacatcgcccgcaccctcatcgcccacctcggg
cagggccggatcgactacatccccttccccgaggagctgcgcggcaagtaccagagcttc
acccaggcggatgtgcggagcctgcgcggagccggcttcgcggcccccttcaccgagctg
gaagcgggcatcgcggcgaccctggcggagatttga
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