KEGG   Geothrix oryzae: GETHOR_22550
Entry
GETHOR_22550      CDS       T09137                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
gex  Geothrix oryzae
Pathway
gex02020  Two-component system
Brite
KEGG Orthology (KO) [BR:gex00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    GETHOR_22550
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:gex02022]
    GETHOR_22550
Two-component system [BR:gex02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   GETHOR_22550
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 AAA AAA_2 Mg_chelatase AAA_22 nSTAND3 TrmB HTH_AraC AAA_29 AAA_3
Other DBs
NCBI-ProteinID: BDU70154
LinkDB
Position
2533853..2535256
AA seq 467 aa
MARVQHGIMRAPITILLVDDEPGIRRSLGEALKDEGYQVVKAERGEQAIDLLHNPDGEGI
QFMLLDVWLPGQDGLETLKQAKQIRPDLPVVMISGHASIDTALQATKLGAFDFLEKPIDL
DRLLLVTGNALRQSQLERENQRLLAEVESGRFFLADSPAMKRLMADVALVAPTEGRVLLT
GENGSGKEEVARLLHLQSPRKEAPFIEVNCAAIPEELIESELFGHQKGAFTGAVRDQKGK
FREADGGTLFLDEVGDMSLKTQAKVLRALQEGRVEPVGGGGAVGVDVRVIAATNKDLASE
ITRGRFREDLYFRLAVVPLRIPPLRERPEDILPLAEAFISRIGRQYGRPPKHLGPEAKDT
LLRHDWPGNVRELKNLMERAVILGRGNEIGPRDLGPLAARHLAEQDPFSFPEFPSLKEAR
DWFEAQYLQREMRLQNGNMTRVAERVGVDRSNLYKRLKALGIEPRES
NT seq 1404 nt   +upstreamnt  +downstreamnt
ttggcccgcgtccagcatggaatcatgcgtgcccccatcaccatcctcctggtggatgac
gagccgggaatccggcggtccctgggcgaagccctgaaggacgagggctatcaggtggtg
aaggccgagcgcggcgaacaggccatcgacctgctgcacaaccccgacggcgagggcatc
cagttcatgctgctggatgtgtggctgccagggcaggatggcctggagacgctgaagcag
gccaagcagatccgccccgacctgcccgtggtcatgatctcgggccacgccagcatcgac
acggccctgcaggccaccaagctgggcgccttcgacttcctcgaaaagcccatcgaccta
gaccgcctgctcctggtgaccggcaacgccctccgtcaatcccagctggagcgagagaac
cagcgcctgctcgccgaggtggaaagcggccgcttcttcctggcggacagccccgccatg
aagcgcctcatggccgatgtggcgctggtggcgcccaccgagggccgcgtgctcctcaca
ggcgagaacggcagcggcaaggaggaggtggcccgcctgttgcatctgcagagcccacgc
aaagaggcccccttcatcgaagtgaactgcgcggccattcccgaagagctcatcgagagc
gaactgttcggccatcagaagggcgccttcaccggcgccgtgcgcgaccagaagggcaag
ttccgcgaggcggacggcggcaccctcttccttgacgaggtgggcgacatgtcgctgaag
acccaggccaaggtgctgcgcgccctccaggagggccgcgtggagccggtgggcgggggc
ggcgccgtgggcgtggatgtgcgcgtgatcgccgccaccaacaaggatctggccagcgag
atcacccggggccgcttccgggaggacctctacttccggctggccgtggtgccgttgcgc
atccctcccctgcgggagcgtcccgaggacatcctgcccctggccgaggccttcatcagc
cgcatcggccgccagtacggccgaccccccaagcacctgggccccgaggccaaggacacc
ctgctgcgccacgactggcccggcaatgtgcgcgagctgaagaacctcatggagcgcgcc
gtcatcctgggccgcggcaacgagatcggcccccgcgacctaggccctctcgccgcgcgc
catctcgcggagcaggaccccttctccttcccggaattccccagcctgaaagaggcccgc
gactggttcgaggcccaatacctccagcgggagatgcgcctccagaacggcaacatgacc
cgcgtggccgagcgcgtgggcgtggaccgctccaacctctacaagcgcctcaaggccctg
ggcatcgagcccagggagagctag

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